RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 CYP24A1Q07973 514 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ELAVL2Q12926 359 aaKnown RBP12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ADAM9Q13443 819 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CAMK1Q14012 370 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PSMD6Q15008 389 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 FUT10Q6P4F1 479 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 FOXR2Q6PJQ5 311 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 USP37Q86T82 979 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 WDR49Q8IV35 697 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 EFCAB13Q8IY85 973 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 VPS52Q8N1B4 723 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 RDH13Q8NBN7 331 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CACTINQ8WUQ7 758 aaKnown RBP12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PPP2R3CQ969Q6 453 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 MFSD14AQ96MC6 490 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 FNBP1Q96RU3 617 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TCF25Q9BQ70 676 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ZBP1Q9H171 429 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PDE11AQ9HCR9 933 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ENTPD7Q9NQZ7 604 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 SSX2IPQ9Y2D8 614 aa12.63□□□□□ -0.39
TRAF3IP1-204ENST00000462122 BICDL2A1A5D9 508 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PPP1R3GB7ZBB8 358 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 FSCN2O14926 492 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CETN3O15182 167 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 EFEMP2O95967 443 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TMEM191BP0C7N4 346 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CD44P16070 742 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 WNT7BP56706 349 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TFAMQ00059 246 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 FKBP3Q00688 224 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ENPEPQ07075 957 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 SMC1AQ14683 1233 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CCDC183Q5T5S1 534 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CEP135Q66GS9 1140 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 RBM43Q6ZSC3 357 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TMC7Q7Z402 723 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 RNF168Q8IYW5 571 aaPredicted RBP12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 MLKLQ8NB16 471 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 MICAL1Q8TDZ2 1067 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 SYAP1Q96A49 352 aaPredicted RBP12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ANKRD36BP1Q96IX9 119 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 MKNK1Q9BUB5 465 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 HERC2P3Q9BVR0 1158 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 NSUN3Q9H649 340 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CACNG4Q9UBN1 327 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 NUB1Q9Y5A7 615 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 EYSQ5T1H1 3165 aa12.62□□□□□ -0.39
TRAF3IP1-204ENST00000462122 FSD2A1L4K1 749 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 F8W810 466 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TULP1O00294 542 aaPredicted RBP12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 SLC16A3O15427 465 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 AKAP3O75969 853 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TNNC2P02585 160 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 URODP06132 367 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 DLATP10515 647 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CTSAP10619 480 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 IRS1P35568 1242 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PSMC2P35998 433 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ERVFC1P60507 584 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PAK1Q13153 545 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 DUOXA2Q1HG44 320 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 USP41Q3LFD5 358 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PLPP4Q5VZY2 271 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 C9orf57Q5W0N0 161 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 KLHL10Q6JEL2 608 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 INTS8Q75QN2 995 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ZC3H3Q8IXZ2 948 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 GPR65Q8IYL9 337 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 C3orf58Q8NDZ4 430 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 HASPINQ8TF76 798 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 NELFBQ8WX92 580 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 RABGGTAQ92696 567 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CCDC127Q96BQ5 260 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CGRRF1Q99675 332 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 VN1R3Q9BXE9 311 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CHST7Q9NS84 486 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 INTS13Q9NVM9 706 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 DPP3Q9NY33 737 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 DACH1Q9UI36 760 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ITGA11Q9UKX5 1188 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 IRAK3Q9Y616 596 aa12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PDCD11Q14690 1871 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PLXNA4Q9HCM2 1894 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 ANO9A1A5B4 782 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TRIM49BA6NDI0 452 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PIRO00625 290 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CSPG5O95196 566 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 EPB41P11171 864 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 KRT13P13646 458 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 TNNI1P19237 187 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PNPLA4P41247 253 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 GLUD2P49448 558 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 CASP4P49662 377 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 GUCY2FP51841 1108 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 AP3M2P53677 418 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PMS1P54277 932 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 NLRP12P59046 1061 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 DSG1Q02413 1049 aa12.6□□□□□ -0.39
TRAF3IP1-204ENST00000462122 PTPN14Q15678 1187 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms