RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CXCL8P10145 99 aa20.67■□□□□ 0.9
VARS-220ENST00000461874 HOXA9P31269 272 aa20.67■□□□□ 0.9
VARS-220ENST00000461874 LIG4P49917 911 aa20.67■□□□□ 0.9
VARS-220ENST00000461874 UVSSAQ2YD98 709 aa20.67■□□□□ 0.9
VARS-220ENST00000461874 AXDND1Q5T1B0 1012 aaPredicted RBP20.67■□□□□ 0.9
VARS-220ENST00000461874 PRSS33Q8NF86 280 aa20.67■□□□□ 0.9
VARS-220ENST00000461874 PRRX2Q99811 253 aa20.67■□□□□ 0.9
VARS-220ENST00000461874 ZHX3Q9H4I2 956 aa20.67■□□□□ 0.9
VARS-220ENST00000461874 NUB1Q9Y5A7 615 aa20.67■□□□□ 0.9
VARS-220ENST00000461874 TTC26A0AVF1 554 aa20.66■□□□□ 0.9
VARS-220ENST00000461874 HNRNPDLO14979 420 aaKnown RBP20.66■□□□□ 0.9
VARS-220ENST00000461874 SYN3O14994 580 aa20.66■□□□□ 0.9
VARS-220ENST00000461874 CEBPZQ03701 1054 aaKnown RBP20.66■□□□□ 0.9
VARS-220ENST00000461874 KYAT1Q16773 422 aa20.66■□□□□ 0.9
VARS-220ENST00000461874 VARS2Q5ST30 1063 aaKnown RBP20.66■□□□□ 0.9
VARS-220ENST00000461874 RTL10Q7L3V2 364 aa20.66■□□□□ 0.9
VARS-220ENST00000461874 GRASPQ7Z6J2 395 aaPredicted RBP20.66■□□□□ 0.9
VARS-220ENST00000461874 SLC7A14Q8TBB6 771 aa20.66■□□□□ 0.9
VARS-220ENST00000461874 CLIC6Q96NY7 704 aa20.66■□□□□ 0.9
VARS-220ENST00000461874 FOXD4L1Q9NU39 408 aa20.66■□□□□ 0.9
VARS-220ENST00000461874 CCDC39Q9UFE4 941 aa20.66■□□□□ 0.9
VARS-220ENST00000461874 DUSP12Q9UNI6 340 aa20.66■□□□□ 0.9
VARS-220ENST00000461874 CACNA1HO95180 2353 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 CCL16O15467 120 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 FAM189A1O60320 539 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 XYLBO75191 536 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 POU2F2P09086 479 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 LAMP2P13473 410 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 NMT1P30419 496 aaKnown RBP20.65■□□□□ 0.9
VARS-220ENST00000461874 ABCD1P33897 745 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 TNFSF9P41273 254 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 GTF2BQ00403 316 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 MRPL58Q14197 206 aaKnown RBP20.65■□□□□ 0.9
VARS-220ENST00000461874 SLC8B1Q6J4K2 584 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 GET4Q7L5D6 327 aaPredicted RBP20.65■□□□□ 0.9
VARS-220ENST00000461874 KRI1Q8N9T8 703 aaKnown RBP20.65■□□□□ 0.9
VARS-220ENST00000461874 RSAD2Q8WXG1 361 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 NXPE3Q969Y0 559 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 SUSD3Q96L08 255 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 STK17AQ9UEE5 414 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 TUBGCP4Q9UGJ1 667 aa20.65■□□□□ 0.9
VARS-220ENST00000461874 MORC2Q9Y6X9 1032 aaPredicted RBP20.65■□□□□ 0.9
VARS-220ENST00000461874 A0A0B4J269 797 aa20.64■□□□□ 0.89
VARS-220ENST00000461874 OGTO15294 1046 aa20.64■□□□□ 0.89
VARS-220ENST00000461874 STX6O43752 255 aa20.64■□□□□ 0.89
VARS-220ENST00000461874 TBC1D4O60343 1298 aa20.64■□□□□ 0.89
VARS-220ENST00000461874 FSHRP23945 695 aa20.64■□□□□ 0.89
VARS-220ENST00000461874 NTHL1P78549 312 aa20.64■□□□□ 0.89
VARS-220ENST00000461874 SPAG1Q07617 926 aa20.64■□□□□ 0.89
VARS-220ENST00000461874 ZBTB6Q15916 424 aa20.64■□□□□ 0.89
VARS-220ENST00000461874 ZBTB41Q5SVQ8 909 aa20.64■□□□□ 0.89
VARS-220ENST00000461874 SLC39A4Q6P5W5 647 aa20.64■□□□□ 0.89
VARS-220ENST00000461874 MAP4K3Q8IVH8 894 aa20.64■□□□□ 0.89
VARS-220ENST00000461874 KIF12Q96FN5 646 aa20.64■□□□□ 0.89
VARS-220ENST00000461874 USP28Q96RU2 1077 aa20.64■□□□□ 0.89
VARS-220ENST00000461874 ZSCAN16Q9H4T2 348 aaPredicted RBP20.64■□□□□ 0.89
VARS-220ENST00000461874 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.64■□□□□ 0.89
VARS-220ENST00000461874 ZFP37Q9Y6Q3 630 aaPredicted RBP20.64■□□□□ 0.89
VARS-220ENST00000461874 CITO14578 2027 aa20.64■□□□□ 0.89
VARS-220ENST00000461874 LACTBL1A8MY62 500 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 H7C4K7 107 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 ABLIM3O94929 683 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 ADRB2P07550 413 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 CYP3A5P20815 502 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 LRPAP1P30533 357 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 MCM4P33991 863 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 TXLNAP40222 546 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 PTPN5P54829 565 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 ROR1Q01973 937 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 PPP2R3AQ06190 1150 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 SLC39A14Q15043 492 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 ENOX2Q16206 610 aaKnown RBP20.63■□□□□ 0.89
VARS-220ENST00000461874 RRAGBQ5VZM2 374 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 TMEM130Q8N3G9 435 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 SLC44A3Q8N4M1 653 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 ZNF461Q8TAF7 563 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 MSTO1Q9BUK6 570 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 ST6GALNAC4Q9H4F1 302 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 RPF1Q9H9Y2 349 aaKnown RBP20.63■□□□□ 0.89
VARS-220ENST00000461874 UBQLN1Q9UMX0 589 aaKnown RBP20.63■□□□□ 0.89
VARS-220ENST00000461874 POLIQ9UNA4 740 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 DOCK8Q8NF50 2099 aa20.63■□□□□ 0.89
VARS-220ENST00000461874 ANHXE9PGG2 379 aa20.62■□□□□ 0.89
VARS-220ENST00000461874 NARSO43776 548 aaKnown RBP20.62■□□□□ 0.89
VARS-220ENST00000461874 NUBP1P53384 320 aa20.62■□□□□ 0.89
VARS-220ENST00000461874 TCF15Q12870 199 aa20.62■□□□□ 0.89
VARS-220ENST00000461874 ZC2HC1CQ53FD0 456 aaPredicted RBP20.62■□□□□ 0.89
VARS-220ENST00000461874 DYMQ7RTS9 669 aa20.62■□□□□ 0.89
VARS-220ENST00000461874 APPL2Q8NEU8 664 aa20.62■□□□□ 0.89
VARS-220ENST00000461874 DDX12PQ92771 950 aa20.62■□□□□ 0.89
VARS-220ENST00000461874 TSPAN18Q96SJ8 248 aa20.62■□□□□ 0.89
VARS-220ENST00000461874 MFSD1Q9H3U5 465 aa20.62■□□□□ 0.89
VARS-220ENST00000461874 FBXL5Q9UKA1 691 aa20.62■□□□□ 0.89
VARS-220ENST00000461874 CDH7Q9ULB5 785 aa20.62■□□□□ 0.89
VARS-220ENST00000461874 PCDHB8Q9UN66 801 aa20.62■□□□□ 0.89
VARS-220ENST00000461874 DOCK6Q96HP0 2047 aa20.61■□□□□ 0.89
VARS-220ENST00000461874 WDR27A2RRH5 827 aa20.61■□□□□ 0.89
VARS-220ENST00000461874 MYMKA6NI61 221 aa20.61■□□□□ 0.89
VARS-220ENST00000461874 ANKRD63C9JTQ0 380 aa20.61■□□□□ 0.89
VARS-220ENST00000461874 HTR4Q13639 388 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms