RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-222	ENST00000461849	PRSS55	Q6UWB4	352 aa	Predicted RBP	15.08	■□□□□ 0
RBM39-222	ENST00000461849	SPATA31D4	Q6ZUB0	917 aa		15.08	■□□□□ 0
RBM39-222	ENST00000461849	TAS1R3	Q7RTX0	852 aa		15.08	■□□□□ 0
RBM39-222	ENST00000461849	BMP8A	Q7Z5Y6	402 aa		15.08	■□□□□ 0
RBM39-222	ENST00000461849	UBALD2	Q8IYN6	164 aa		15.08	■□□□□ 0
RBM39-222	ENST00000461849	ZDHHC14	Q8IZN3	488 aa		15.08	■□□□□ 0
RBM39-222	ENST00000461849	CEP120	Q8N960	986 aa		15.08	■□□□□ 0
RBM39-222	ENST00000461849	KREMEN2	Q8NCW0	462 aa		15.08	■□□□□ 0
RBM39-222	ENST00000461849	DNAJC19	Q96DA6	116 aa		15.08	■□□□□ 0
RBM39-222	ENST00000461849	PPP1R10	Q96QC0	940 aa	Known RBP	15.08	■□□□□ 0
RBM39-222	ENST00000461849	REEP2	Q9BRK0	252 aa		15.08	■□□□□ 0
RBM39-222	ENST00000461849	CXCL16	Q9H2A7	254 aa		15.08	■□□□□ 0
RBM39-222	ENST00000461849	PTPRH	Q9HD43	1115 aa		15.08	■□□□□ 0
RBM39-222	ENST00000461849	ANKFY1	Q9P2R3	1169 aa		15.08	■□□□□ 0
RBM39-222	ENST00000461849	LIMD1	Q9UGP4	676 aa		15.08	■□□□□ 0
RBM39-222	ENST00000461849	NPHP3-ACAD11	A0A0J9YXS1	232 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	SMIM28	A0A1B0GU29	152 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	PVALEF	A0A1B0GWK0	134 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	FRMD3	A2A2Y4	597 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	CLDN3	O15551	220 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	TOM1L1	O75674	476 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	FAM13A	O94988	1023 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	GAP43	P17677	238 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	AFM	P43652	599 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	NOLC1	Q14978	699 aa	Known RBP eCLIP	15.07	■□□□□ 0
RBM39-222	ENST00000461849	POSTN	Q15063	836 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	NFKBIB	Q15653	356 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	KLHL40	Q2TBA0	621 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	SKOR2	Q2VWA4	1001 aa	Predicted RBP	15.07	■□□□□ 0
RBM39-222	ENST00000461849	LIN9	Q5TKA1	542 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	15.07	■□□□□ 0
RBM39-222	ENST00000461849	MYCT1	Q8N699	235 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	TMEM161B	Q8NDZ6	487 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	PIK3R5	Q8WYR1	880 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	SMG7	Q92540	1137 aa	Known RBP	15.07	■□□□□ 0
RBM39-222	ENST00000461849	KCNH6	Q9H252	994 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	CLSTN2	Q9H4D0	955 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	ZDHHC7	Q9NXF8	308 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	MYH11	P35749	1972 aa		15.07	■□□□□ 0
RBM39-222	ENST00000461849	TMEM189-UBE2V1	I3L0A0	370 aa		15.06	■□□□□ 0
RBM39-222	ENST00000461849	TBCA	O75347	108 aa	Known RBP	15.06	■□□□□ 0
RBM39-222	ENST00000461849	RFPL2	O75678	378 aa		15.06	■□□□□ 0
RBM39-222	ENST00000461849	MAPT	P10636	758 aa	Known RBP	15.06	■□□□□ 0
RBM39-222	ENST00000461849	SCP2	P22307	547 aa		15.06	■□□□□ 0
RBM39-222	ENST00000461849	PROZ	P22891	400 aa		15.06	■□□□□ 0
RBM39-222	ENST00000461849	DPYD	Q12882	1025 aa		15.06	■□□□□ 0
RBM39-222	ENST00000461849	UPP1	Q16831	310 aa		15.06	■□□□□ 0
RBM39-222	ENST00000461849	ZPBP2	Q6X784	338 aa		15.06	■□□□□ 0
RBM39-222	ENST00000461849	GRAMD1C	Q8IYS0	662 aa		15.06	■□□□□ 0
RBM39-222	ENST00000461849	LNX1	Q8TBB1	728 aa	Predicted RBP	15.06	■□□□□ 0
RBM39-222	ENST00000461849	DDX27	Q96GQ7	796 aa	Known RBP	15.06	■□□□□ 0
RBM39-222	ENST00000461849	ZBTB45	Q96K62	511 aa	Predicted RBP	15.06	■□□□□ 0
RBM39-222	ENST00000461849	ZHX3	Q9H4I2	956 aa		15.06	■□□□□ 0
RBM39-222	ENST00000461849	PARVG	Q9HBI0	331 aa		15.06	■□□□□ 0
RBM39-222	ENST00000461849	GOLGA2P5	Q9HBQ8	144 aa		15.06	■□□□□ 0
RBM39-222	ENST00000461849	SEL1L	Q9UBV2	794 aa		15.06	■□□□□ 0
RBM39-222	ENST00000461849	PLXNA3	P51805	1871 aa		15.06	■□□□□ 0
RBM39-222	ENST00000461849		K7ENM7	598 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	ASGR2	P07307	311 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	GBP2	P32456	591 aa	Predicted RBP	15.05	■□□□□ -0
RBM39-222	ENST00000461849	LIG4	P49917	911 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	NCKAP1L	P55160	1127 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	ASIC1	P78348	528 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	CUL4B	Q13620	913 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	XKR4	Q5GH76	650 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	ALKAL1	Q6UXT8	129 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	UNC13D	Q70J99	1090 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	DYM	Q7RTS9	669 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	HAUS6	Q7Z4H7	955 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	CCDC65	Q8IXS2	484 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	FBXL6	Q8N531	539 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	SPATA20	Q8TB22	786 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	KCNN1	Q92952	543 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	SNX27	Q96L92	541 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	CLSTN3	Q9BQT9	956 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	RHOBTB2	Q9BYZ6	727 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	NUP62CL	Q9H1M0	184 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	WDR6	Q9NNW5	1121 aa	Known RBP	15.05	■□□□□ -0
RBM39-222	ENST00000461849	NUB1	Q9Y5A7	615 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	WDFY4	Q6ZS81	3184 aa		15.05	■□□□□ -0
RBM39-222	ENST00000461849	CLUH	O75153	1309 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	PODXL	O00592	558 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	HNRNPDL	O14979	420 aa	Known RBP	15.04	■□□□□ -0
RBM39-222	ENST00000461849	TRAK2	O60296	914 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	SMC2	O95347	1197 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	KCNE1	P15382	129 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	ABCD1	P33897	745 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	KCNB1	Q14721	858 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	PPM1L	Q5SGD2	360 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	LILRA6	Q6PI73	481 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	ANKS3	Q6ZW76	656 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	FEZF2	Q8TBJ5	459 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	CCDC47	Q96A33	483 aa	Known RBP	15.04	■□□□□ -0
RBM39-222	ENST00000461849	SYAP1	Q96A49	352 aa	Predicted RBP	15.04	■□□□□ -0
RBM39-222	ENST00000461849	ASIC4	Q96FT7	647 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	GSDMA	Q96QA5	445 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	GTPBP4	Q9BZE4	634 aa	Known RBP	15.04	■□□□□ -0
RBM39-222	ENST00000461849	PRKD2	Q9BZL6	878 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	BLZF1	Q9H2G9	400 aa		15.04	■□□□□ -0
RBM39-222	ENST00000461849	OLFML3	Q9NRN5	406 aa		15.04	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms