RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 FKBP15Q5T1M5 1219 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 KRT39Q6A163 491 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 CRELD2Q6UXH1 353 aaPredicted RBP11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 LRRC55Q6ZSA7 311 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 C11orf57Q6ZUT1 292 aaPredicted RBP11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 CRIPAKQ8N1N5 446 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 CEP120Q8N960 986 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 TAF4BQ92750 862 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 LPPQ93052 612 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 ZNF689Q96CS4 500 aaPredicted RBP11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 CNOT6LQ96LI5 555 aaKnown RBP11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 CASD1Q96PB1 797 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 PLVAPQ9BX97 442 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 HAPLN2Q9GZV7 340 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 INTS13Q9NVM9 706 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 KLK14Q9P0G3 267 aa11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 PUF60Q9UHX1 559 aaKnown RBP11.91□□□□□ -0.5
SMNDC1-203ENST00000460483 WDR81Q562E7 1941 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 CLSTN1O94985 981 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 SERPINC1P01008 464 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 AFPP02771 609 aaKnown RBP11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 ATICP31939 592 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 TNFSF9P41273 254 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 CASP4P49662 377 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 SCNN1GP51170 649 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 WDR44Q5JSH3 913 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 CLLU1OSQ5K130 101 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 SMYD5Q6GMV2 418 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 JADE1Q6IE81 842 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 FAM117BQ6P1L5 589 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 DCLRE1AQ6PJP8 1040 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 TTC39CQ8N584 583 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 LRRC52Q8N7C0 313 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 VWCEQ96DN2 955 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 FAXDC2Q96IV6 333 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 ZFP42Q96MM3 310 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 ZNF558Q96NG5 402 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 TUBGCP2Q9BSJ2 902 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 SLC28A3Q9HAS3 691 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 CBX8Q9HC52 389 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 TMEM8AQ9HCN3 771 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 PDE11AQ9HCR9 933 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 TBC1D13Q9NVG8 400 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 FANCLQ9NW38 375 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 DPP3Q9NY33 737 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 CXXC1Q9P0U4 656 aaPredicted RBP11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 SSX2IPQ9Y2D8 614 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 FAN1Q9Y2M0 1017 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 NUB1Q9Y5A7 615 aa11.9□□□□□ -0.5
SMNDC1-203ENST00000460483 TANC1Q9C0D5 1861 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 DNAH12Q6ZR08 3092 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 PMM2O15305 246 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 CBFA2T2O43439 604 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 ZC3H11AO75152 810 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 TADA2AO75478 443 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 RB1P06400 928 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 KRT19P08727 400 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 MXI1P50539 228 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 MCCD1P59942 119 aaPredicted RBP11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 ZBTB6Q15916 424 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 SGSM1Q2NKQ1 1148 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 SV2CQ496J9 727 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 C9orf50Q5SZB4 431 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 PDXDC1Q6P996 788 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 TRIM59Q8IWR1 403 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 EEF2KMTQ96G04 330 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 TMEM169Q96HH4 297 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 PPP1R10Q96QC0 940 aaKnown RBP11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 IKZF4Q9H2S9 585 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 FAM124BQ9H5Z6 455 aaPredicted RBP11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 DAAM1Q9Y4D1 1078 aa11.89□□□□□ -0.51
SMNDC1-203ENST00000460483 TMEM265A0A087WTH1 108 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 GTPBP10A4D1E9 387 aaKnown RBP11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 LRRC10BA6NIK2 292 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 B3GAT3O94766 335 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 LRPAP1P30533 357 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 OR1G1P47890 313 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 KCNH2Q12809 1159 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 TCTN1Q2MV58 587 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 UVSSAQ2YD98 709 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 LRIT3Q3SXY7 679 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 VWA3BQ502W6 1294 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 PAN2Q504Q3 1202 aaKnown RBP11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 GLRA4Q5JXX5 417 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 ZBTB41Q5SVQ8 909 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 CDKAL1Q5VV42 579 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 TRAPPC11Q7Z392 1133 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 FMNL3Q8IVF7 1028 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 DHX40Q8IX18 779 aaKnown RBP11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 TMEM192Q8IY95 271 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 FBXL13Q8NEE6 735 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 BORCS6Q96GS4 357 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 C11orf84Q9BUA3 381 aaPredicted RBP11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 OXCT2Q9BYC2 517 aaPredicted RBP11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 NDST4Q9H3R1 872 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 SAMSN1Q9NSI8 373 aaKnown RBP11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 SPG21Q9NZD8 308 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 DSEQ9UL01 958 aa11.88□□□□□ -0.51
SMNDC1-203ENST00000460483 EVPLQ92817 2033 aa11.87□□□□□ -0.51
SMNDC1-203ENST00000460483 SF3B1O75533 1304 aaKnown RBP eCLIP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms