RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 RNF149Q8NC42 400 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 EPS8L1Q8TE68 723 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 GPRASP2Q96D09 838 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 ISCUQ9H1K1 167 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 KCNK9Q9NPC2 374 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 ADAM22Q9P0K1 906 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 PLA2G6O60733 806 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 DIAPH2O60879 1101 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 GJB6O95452 261 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 NLRP11P59045 1033 aaKnown RBP16.41■□□□□ 0.22
LMNB1-203ENST00000460265 ELF3P78545 371 aaPredicted RBP16.41■□□□□ 0.22
LMNB1-203ENST00000460265 ITIH3Q06033 890 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 ZNF365Q70YC5 407 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 ACTRT1Q8TDG2 376 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 ATG4AQ8WYN0 398 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 BORCS6Q96GS4 357 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 FAM114A2Q9NRY5 505 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 PNMA2Q9UL42 364 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 ACSL3O95573 720 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 NEFHP12036 1026 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 IFNAR2P48551 515 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 LY6KQ17RY6 165 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 HP1BP3Q5SSJ5 553 aaPredicted RBP16.4■□□□□ 0.22
LMNB1-203ENST00000460265 SLC30A9Q6PML9 568 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 SLC17A8Q8NDX2 589 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 HOMER3Q9NSC5 361 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 C15orf41Q9Y2V0 281 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 HMGB1P1B2RPK0 211 aaPredicted RBP16.4■□□□□ 0.22
LMNB1-203ENST00000460265 C19orf81C9J6K1 198 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 PI4K2BG5E9Z4 385 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 TMEM191BP0C7N4 346 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 MAGOHP61326 146 aaKnown RBP16.4■□□□□ 0.22
LMNB1-203ENST00000460265 C3orf20Q8ND61 904 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 CD2APQ9Y5K6 639 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 MYBL1P10243 752 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 PYGMP11217 842 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 FGFR4P22455 802 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 CYP24A1Q07973 514 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 KCTD2Q14681 263 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 TRIM7Q9C029 511 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 ZNF541Q9H0D2 1346 aa16.4■□□□□ 0.22
LMNB1-203ENST00000460265 ANKRD31Q8N7Z5 1873 aa16.39■□□□□ 0.22
LMNB1-203ENST00000460265 RRM1P23921 792 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 CDCA2Q69YH5 1023 aaPredicted RBP16.39■□□□□ 0.21
LMNB1-203ENST00000460265 ERVK-5Q9HDB9 667 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 GDF3Q9NR23 364 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 NOP53Q9NZM5 478 aaKnown RBP16.39■□□□□ 0.21
LMNB1-203ENST00000460265 INTUQ9ULD6 942 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 ADM5C9JUS6 153 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 MGRN1O60291 552 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 SMIM24O75264 130 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 WEE2P0C1S8 567 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 FDX1P10109 184 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 GNA15P30679 374 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 XRCC4Q13426 336 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 QPCTQ16769 361 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 CCDC38Q502W7 563 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 NIPA1Q7RTP0 329 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 JAMLQ86YT9 394 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 SLC9A9Q8IVB4 645 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 ZC3H3Q8IXZ2 948 aaKnown RBP16.39■□□□□ 0.21
LMNB1-203ENST00000460265 FBXO25Q8TCJ0 367 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 TRAPPC12Q8WVT3 735 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 ZNF831Q5JPB2 1677 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 RGS16O15492 202 aaPredicted RBP16.39■□□□□ 0.21
LMNB1-203ENST00000460265 DYNLT1P63172 113 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 MTMR3Q13615 1198 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 MTMR14Q8NCE2 650 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 NLGN2Q8NFZ4 835 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 NEUROG2Q9H2A3 272 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 SLITRK6Q9H5Y7 841 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 TBK1Q9UHD2 729 aa16.39■□□□□ 0.21
LMNB1-203ENST00000460265 RFX1P22670 979 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 PDCD2Q16342 344 aaPredicted RBP16.38■□□□□ 0.21
LMNB1-203ENST00000460265 TREML2Q5T2D2 321 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 MAP4K3Q8IVH8 894 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 ACSF2Q96CM8 615 aaPredicted RBP16.38■□□□□ 0.21
LMNB1-203ENST00000460265 FAM210AQ96ND0 272 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 CARD9Q9H257 536 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 SYNGAP1Q96PV0 1343 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 MIF4GDA9UHW6 222 aaKnown RBP16.38■□□□□ 0.21
LMNB1-203ENST00000460265 MAFGO15525 162 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 SUPT20HL2P0C7V6 817 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 ANXA13P27216 316 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 TCF7P36402 384 aaPredicted RBP16.38■□□□□ 0.21
LMNB1-203ENST00000460265 ORC1Q13415 861 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 ZBTB41Q5SVQ8 909 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 ZBTB8OSQ8IWT0 167 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 IQCKQ8N0W5 287 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 PRPF31Q8WWY3 499 aaKnown RBP16.38■□□□□ 0.21
LMNB1-203ENST00000460265 TSC22D3Q99576 134 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 RNF181Q9P0P0 153 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 ZNF214Q9UL59 606 aaPredicted RBP16.38■□□□□ 0.21
LMNB1-203ENST00000460265 BRWD3Q6RI45 1802 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 UPP2O95045 317 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 CDR2Q01850 454 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 MTM1Q13496 603 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 ZC3H12AQ5D1E8 599 aaKnown RBP16.38■□□□□ 0.21
LMNB1-203ENST00000460265 FAM160B1Q5W0V3 765 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 SCFD2Q8WU76 684 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms