RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 FOSL2P15408 326 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 TNNI1P19237 187 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 POU3F3P20264 500 aaPredicted RBP11.76□□□□□ -0.53
CCDC12-204ENST00000460035 CYP3A5P20815 502 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 CCNE1P24864 410 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 DNAJB1P25685 340 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 CASP4P49662 377 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 PMS1P54277 932 aaKnown RBP11.76□□□□□ -0.53
CCDC12-204ENST00000460035 WNT7BP56706 349 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 NLRP12P59046 1061 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 UBE3AQ05086 875 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 CYP24A1Q07973 514 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 BMS1Q14692 1282 aaKnown RBP11.76□□□□□ -0.53
CCDC12-204ENST00000460035 CAVIN1Q6NZI2 390 aaKnown RBP11.76□□□□□ -0.53
CCDC12-204ENST00000460035 SASS6Q6UVJ0 657 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 TMC7Q7Z402 723 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 DDX53Q86TM3 631 aaKnown RBP11.76□□□□□ -0.53
CCDC12-204ENST00000460035 NT5DC4Q86YG4 428 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 VPS52Q8N1B4 723 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 TMEM130Q8N3G9 435 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 MLKLQ8NB16 471 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 BCL7CQ8WUZ0 217 aaPredicted RBP11.76□□□□□ -0.53
CCDC12-204ENST00000460035 SYAP1Q96A49 352 aaPredicted RBP11.76□□□□□ -0.53
CCDC12-204ENST00000460035 EEF2KMTQ96G04 330 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 MFSD14AQ96MC6 490 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 POP1Q99575 1024 aaKnown RBP11.76□□□□□ -0.53
CCDC12-204ENST00000460035 LMAN2LQ9H0V9 348 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 MARCH5Q9NX47 278 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 DPP3Q9NY33 737 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 LMCD1Q9NZU5 365 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 CTNND2Q9UQB3 1225 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 LZTS1Q9Y250 596 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 R3HCC1Q9Y3T6 440 aaKnown RBP11.76□□□□□ -0.53
CCDC12-204ENST00000460035 C2CD2Q9Y426 696 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 NUB1Q9Y5A7 615 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 MYH10P35580 1976 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 BICDL2A1A5D9 508 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 TMEM189-UBE2V1I3L0A0 370 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 MAPK13O15264 365 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 CXCL14O95715 111 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 EFEMP2O95967 443 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 IGFBP6P24592 240 aaPredicted RBP11.75□□□□□ -0.53
CCDC12-204ENST00000460035 LRPAP1P30533 357 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 PSMC2P35998 433 aaKnown RBP11.75□□□□□ -0.53
CCDC12-204ENST00000460035 ERVFC1P60507 584 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 FKBP3Q00688 224 aaKnown RBP11.75□□□□□ -0.53
CCDC12-204ENST00000460035 LRRC63Q05C16 580 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 PAK1Q13153 545 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 PSMD6Q15008 389 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 CCDC85BQ15834 202 aaPredicted RBP11.75□□□□□ -0.53
CCDC12-204ENST00000460035 UPP1Q16831 310 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 SPATA1Q5VX52 437 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 LMBRD2Q68DH5 695 aaPredicted RBP11.75□□□□□ -0.53
CCDC12-204ENST00000460035 KIAA1841Q6NSI8 718 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 ZC3H3Q8IXZ2 948 aaKnown RBP11.75□□□□□ -0.53
CCDC12-204ENST00000460035 EFCAB13Q8IY85 973 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 PPM1EQ8WY54 764 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 MRPL38Q96DV4 380 aaKnown RBP11.75□□□□□ -0.53
CCDC12-204ENST00000460035 ENTPD7Q9NQZ7 604 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 TLR9Q9NR96 1032 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 TMEM63CQ9P1W3 806 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 ADAM28Q9UKQ2 775 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 MTCH2Q9Y6C9 303 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 CDH23Q9H251 3354 aa11.75□□□□□ -0.53
CCDC12-204ENST00000460035 I3L4J1 428 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 TRAPPC3O43617 180 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 AKAP3O75969 853 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 KIF4AO95239 1232 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 TNNC2P02585 160 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 KRT19P08727 400 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 TMEM191BP0C7N4 346 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 KRT13P13646 458 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 IRS1P35568 1242 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 DUOXA2Q1HG44 320 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 KLHL40Q2TBA0 621 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 SKOR2Q2VWA4 1001 aaPredicted RBP11.74□□□□□ -0.53
CCDC12-204ENST00000460035 FAM171A1Q5VUB5 890 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 PLPP4Q5VZY2 271 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 FUT10Q6P4F1 479 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 TAS1R1Q7RTX1 841 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 CEP57Q86XR8 500 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 FAM186BQ8IYM0 893 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 RNF168Q8IYW5 571 aaPredicted RBP11.74□□□□□ -0.53
CCDC12-204ENST00000460035 CSGALNACT2Q8N6G5 542 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 ANKRD36BP1Q96IX9 119 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 FAM84AQ96KN4 292 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 TCF25Q9BQ70 676 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 GPR62Q9BZJ7 368 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 INTS13Q9NVM9 706 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 STK39Q9UEW8 545 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 DACH1Q9UI36 760 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 AGAP1Q9UPQ3 857 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 PTPRDP23468 1912 aa11.74□□□□□ -0.53
CCDC12-204ENST00000460035 C2CD2LO14523 706 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 PHACTR2O75167 634 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 SF3B1O75533 1304 aaKnown RBP eCLIP11.73□□□□□ -0.533e-6■■■■■ 41.8
CCDC12-204ENST00000460035 EPB41P11171 864 aaKnown RBP11.73□□□□□ -0.53
CCDC12-204ENST00000460035 BRCC3P46736 316 aa11.73□□□□□ -0.53
CCDC12-204ENST00000460035 MCCD1P59942 119 aaPredicted RBP11.73□□□□□ -0.53
CCDC12-204ENST00000460035 RBP5P82980 135 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms