RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 PIGRP01833 764 aa22.78■■□□□ 1.24
SRM-202ENST00000459997 HNRNPA1P09651 372 aaKnown RBP eCLIP22.78■■□□□ 1.24
SRM-202ENST00000459997 TNFSF9P41273 254 aa22.78■■□□□ 1.24
SRM-202ENST00000459997 TDGQ13569 410 aa22.78■■□□□ 1.24
SRM-202ENST00000459997 RSPO2Q6UXX9 243 aaPredicted RBP22.78■■□□□ 1.24
SRM-202ENST00000459997 GET4Q7L5D6 327 aaPredicted RBP22.78■■□□□ 1.24
SRM-202ENST00000459997 KRI1Q8N9T8 703 aaKnown RBP22.78■■□□□ 1.24
SRM-202ENST00000459997 SLC7A14Q8TBB6 771 aa22.78■■□□□ 1.24
SRM-202ENST00000459997 USP28Q96RU2 1077 aa22.78■■□□□ 1.24
SRM-202ENST00000459997 MYADMQ96S97 322 aa22.78■■□□□ 1.24
SRM-202ENST00000459997 ZSCAN16Q9H4T2 348 aaPredicted RBP22.78■■□□□ 1.24
SRM-202ENST00000459997 PLEKHA5Q9HAU0 1116 aa22.78■■□□□ 1.24
SRM-202ENST00000459997 NMT1P30419 496 aaKnown RBP22.77■■□□□ 1.24
SRM-202ENST00000459997 PPP2R3AQ06190 1150 aa22.77■■□□□ 1.24
SRM-202ENST00000459997 SPAG1Q07617 926 aa22.77■■□□□ 1.24
SRM-202ENST00000459997 KYAT1Q16773 422 aa22.77■■□□□ 1.24
SRM-202ENST00000459997 VARS2Q5ST30 1063 aaKnown RBP22.77■■□□□ 1.24
SRM-202ENST00000459997 AXDND1Q5T1B0 1012 aaPredicted RBP22.77■■□□□ 1.24
SRM-202ENST00000459997 RRAGBQ5VZM2 374 aa22.77■■□□□ 1.24
SRM-202ENST00000459997 DYMQ7RTS9 669 aa22.77■■□□□ 1.24
SRM-202ENST00000459997 SNX21Q969T3 373 aa22.77■■□□□ 1.24
SRM-202ENST00000459997 FIZ1Q96SL8 496 aa22.77■■□□□ 1.24
SRM-202ENST00000459997 IGSF9Q9P2J2 1179 aa22.77■■□□□ 1.24
SRM-202ENST00000459997 EPS15L1Q9UBC2 864 aa22.77■■□□□ 1.24
SRM-202ENST00000459997 TTC26A0AVF1 554 aa22.76■■□□□ 1.23
SRM-202ENST00000459997 SYN3O14994 580 aa22.76■■□□□ 1.23
SRM-202ENST00000459997 OGTO15294 1046 aa22.76■■□□□ 1.23
SRM-202ENST00000459997 CCL16O15467 120 aa22.76■■□□□ 1.23
SRM-202ENST00000459997 HOXA9P31269 272 aa22.76■■□□□ 1.23
SRM-202ENST00000459997 ABCD1P33897 745 aa22.76■■□□□ 1.23
SRM-202ENST00000459997 MCM4P33991 863 aa22.76■■□□□ 1.23
SRM-202ENST00000459997 VCPP55072 806 aaKnown RBP22.76■■□□□ 1.23
SRM-202ENST00000459997 GTF2BQ00403 316 aa22.76■■□□□ 1.23
SRM-202ENST00000459997 ZBTB41Q5SVQ8 909 aa22.76■■□□□ 1.23
SRM-202ENST00000459997 IER5LQ5T953 404 aa22.76■■□□□ 1.23
SRM-202ENST00000459997 GRASPQ7Z6J2 395 aaPredicted RBP22.76■■□□□ 1.23
SRM-202ENST00000459997 KIF12Q96FN5 646 aa22.76■■□□□ 1.23
SRM-202ENST00000459997 MSTO1Q9BUK6 570 aa22.76■■□□□ 1.23
SRM-202ENST00000459997 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.76■■□□□ 1.23
SRM-202ENST00000459997 POLIQ9UNA4 740 aa22.76■■□□□ 1.23
SRM-202ENST00000459997 A0A0B4J269 797 aa22.75■■□□□ 1.23
SRM-202ENST00000459997 FAM189A1O60320 539 aa22.75■■□□□ 1.23
SRM-202ENST00000459997 XYLBO75191 536 aa22.75■■□□□ 1.23
SRM-202ENST00000459997 FSHRP23945 695 aa22.75■■□□□ 1.23
SRM-202ENST00000459997 SLC39A14Q15043 492 aa22.75■■□□□ 1.23
SRM-202ENST00000459997 ENOX2Q16206 610 aaKnown RBP22.75■■□□□ 1.23
SRM-202ENST00000459997 ZC2HC1CQ53FD0 456 aaPredicted RBP22.75■■□□□ 1.23
SRM-202ENST00000459997 SLC39A4Q6P5W5 647 aa22.75■■□□□ 1.23
SRM-202ENST00000459997 SFR1Q86XK3 245 aa22.75■■□□□ 1.23
SRM-202ENST00000459997 MAP4K3Q8IVH8 894 aa22.75■■□□□ 1.23
SRM-202ENST00000459997 TMEM130Q8N3G9 435 aa22.75■■□□□ 1.23
SRM-202ENST00000459997 SUSD3Q96L08 255 aa22.75■■□□□ 1.23
SRM-202ENST00000459997 MYH15Q9Y2K3 1946 aa22.74■■□□□ 1.23
SRM-202ENST00000459997 LACTBL1A8MY62 500 aa22.74■■□□□ 1.23
SRM-202ENST00000459997 AVPR2P30518 371 aa22.74■■□□□ 1.23
SRM-202ENST00000459997 NTHL1P78549 312 aa22.74■■□□□ 1.23
SRM-202ENST00000459997 ROR1Q01973 937 aa22.74■■□□□ 1.23
SRM-202ENST00000459997 NHLH1Q02575 133 aa22.74■■□□□ 1.23
SRM-202ENST00000459997 UVSSAQ2YD98 709 aa22.74■■□□□ 1.23
SRM-202ENST00000459997 SLC8B1Q6J4K2 584 aa22.74■■□□□ 1.23
SRM-202ENST00000459997 SV2BQ7L1I2 683 aa22.74■■□□□ 1.23
SRM-202ENST00000459997 PRSS33Q8NF86 280 aa22.74■■□□□ 1.23
SRM-202ENST00000459997 RSAD2Q8WXG1 361 aa22.74■■□□□ 1.23
SRM-202ENST00000459997 DDX12PQ92771 950 aa22.74■■□□□ 1.23
SRM-202ENST00000459997 RPF1Q9H9Y2 349 aaKnown RBP22.74■■□□□ 1.23
SRM-202ENST00000459997 UBQLN1Q9UMX0 589 aaKnown RBP22.74■■□□□ 1.23
SRM-202ENST00000459997 DUSP12Q9UNI6 340 aa22.74■■□□□ 1.23
SRM-202ENST00000459997 MORC2Q9Y6X9 1032 aaPredicted RBP22.74■■□□□ 1.23
SRM-202ENST00000459997 MYMKA6NI61 221 aa22.73■■□□□ 1.23
SRM-202ENST00000459997 H7C4K7 107 aa22.73■■□□□ 1.23
SRM-202ENST00000459997 LAMP2P13473 410 aa22.73■■□□□ 1.23
SRM-202ENST00000459997 ARPP19P56211 112 aa22.73■■□□□ 1.23
SRM-202ENST00000459997 CCDC73Q6ZRK6 1079 aa22.73■■□□□ 1.23
SRM-202ENST00000459997 MFSD1Q9H3U5 465 aa22.73■■□□□ 1.23
SRM-202ENST00000459997 ST6GALNAC4Q9H4F1 302 aa22.73■■□□□ 1.23
SRM-202ENST00000459997 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.73■■□□□ 1.23
SRM-202ENST00000459997 DOCK8Q8NF50 2099 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 WDR27A2RRH5 827 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 ANKRD63C9JTQ0 380 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 XPOTO43592 962 aaKnown RBP22.72■■□□□ 1.23
SRM-202ENST00000459997 TBC1D4O60343 1298 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 LRPAP1P30533 357 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 STAT6P42226 847 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 NASPP49321 788 aaPredicted RBP22.72■■□□□ 1.23
SRM-202ENST00000459997 MRPL58Q14197 206 aaKnown RBP22.72■■□□□ 1.23
SRM-202ENST00000459997 STK38Q15208 465 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 ZBTB6Q15916 424 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 CTXN3Q4LDR2 81 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 RTL10Q7L3V2 364 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 ZNF461Q8TAF7 563 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 FAM212AQ96EL1 285 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 PRRX2Q99811 253 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 PANK2Q9BZ23 570 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 FBXL5Q9UKA1 691 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 CPSF3Q9UKF6 684 aaKnown RBP22.72■■□□□ 1.23
SRM-202ENST00000459997 PCDHB8Q9UN66 801 aa22.72■■□□□ 1.23
SRM-202ENST00000459997 ZDBF2Q9HCK1 2354 aa22.71■■□□□ 1.23
SRM-202ENST00000459997 TISP43B9A030 160 aa22.71■■□□□ 1.23
SRM-202ENST00000459997 NARSO43776 548 aaKnown RBP22.71■■□□□ 1.23
SRM-202ENST00000459997 POU2F2P09086 479 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms