RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 CTNNAL1Q9UBT7 734 aa9.06□□□□□ -0.96
VPS50-208ENST00000458707 GGT7Q9UJ14 662 aa9.06□□□□□ -0.96
VPS50-208ENST00000458707 BLOC1S6Q9UL45 172 aa9.06□□□□□ -0.96
VPS50-208ENST00000458707 A8MUI8 341 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 C6orf229H3BNL8 230 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 CLDN3O15551 220 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 CDH16O75309 829 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 SMNDC1O75940 238 aaKnown RBP eCLIP9.05□□□□□ -0.96
VPS50-208ENST00000458707 ATP5HO75947 161 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 DLATP10515 647 aaKnown RBP9.05□□□□□ -0.96
VPS50-208ENST00000458707 PECAM1P16284 738 aaPredicted RBP9.05□□□□□ -0.96
VPS50-208ENST00000458707 ATP2A2P16615 1042 aaKnown RBP9.05□□□□□ -0.96
VPS50-208ENST00000458707 TAC1P20366 129 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 HOXA13P31271 388 aaPredicted RBP9.05□□□□□ -0.96
VPS50-208ENST00000458707 STX2P32856 288 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 SLC18A1P54219 525 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 SNAP25P60880 206 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 ATP11AP98196 1134 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 NFIAQ12857 509 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 CERKLQ49MI3 558 aaPredicted RBP9.05□□□□□ -0.96
VPS50-208ENST00000458707 SGO2Q562F6 1265 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 CDCA2Q69YH5 1023 aaPredicted RBP9.05□□□□□ -0.96
VPS50-208ENST00000458707 PPP1R21Q6ZMI0 780 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 RGS9BPQ6ZS82 235 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 ECHDC2Q86YB7 292 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 SYCP3Q8IZU3 236 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 KIRREL3Q8IZU9 778 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 SPICE1Q8N0Z3 855 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 RIBC1Q8N443 379 aaPredicted RBP9.05□□□□□ -0.96
VPS50-208ENST00000458707 KIF2BQ8N4N8 673 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 GRK7Q8WTQ7 553 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 KREMEN1Q96MU8 473 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 RAB3IPQ96QF0 476 aaPredicted RBP9.05□□□□□ -0.96
VPS50-208ENST00000458707 TMEM206Q9H813 350 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 KCNQ5Q9NR82 932 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 TXLNGQ9NUQ3 528 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 NINJ2Q9NZG7 142 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 WRAP73Q9P2S5 460 aaPredicted RBP9.05□□□□□ -0.96
VPS50-208ENST00000458707 NEU2Q9Y3R4 380 aa9.05□□□□□ -0.96
VPS50-208ENST00000458707 KLRG2A4D1S0 409 aaPredicted RBP9.04□□□□□ -0.96
VPS50-208ENST00000458707 E7ENQ6 273 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 HIP1RO75146 1068 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 GAS8O95995 478 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 NDUFB10O96000 172 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 ABHD2P08910 425 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 SLURP2P0DP57 97 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 GCLMP48507 274 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 ITGA8P53708 1063 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 YARSP54577 528 aaKnown RBP9.04□□□□□ -0.96
VPS50-208ENST00000458707 SNRPFP62306 86 aaKnown RBP9.04□□□□□ -0.96
VPS50-208ENST00000458707 CDR2Q01850 454 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 BLMHQ13867 455 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 STAT4Q14765 748 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 KYNUQ16719 465 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 SHROOM1Q2M3G4 852 aaPredicted RBP9.04□□□□□ -0.96
VPS50-208ENST00000458707 CMPK2Q5EBM0 449 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 SPDYAQ5MJ70 313 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 ANKRD20A2Q5SQ80 823 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 TMEM63BQ5T3F8 832 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 ANKRD20A1Q5TYW2 823 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 ANKRD20A3Q5VUR7 823 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 TMEM179Q6ZVK1 233 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 SLC47A2Q86VL8 602 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 ZFPM1Q8IX07 1006 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 SP8Q8IXZ3 490 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 CYP4X1Q8N118 509 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 ANKRD42Q8N9B4 389 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 RDH13Q8NBN7 331 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 GDAP1Q8TB36 358 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 PLEKHO2Q8TD55 490 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 FBF1Q8TES7 1133 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 C1orf54Q8WWF1 131 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 KAT5Q92993 513 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 TEKT1Q969V4 418 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 UTP4Q969X6 686 aaKnown RBP9.04□□□□□ -0.96
VPS50-208ENST00000458707 ZNF653Q96CK0 615 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 BTBD6Q96KE9 485 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 WDR11Q9BZH6 1224 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 DCLK3Q9C098 648 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 LRMDAQ9H2I8 198 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 KCNK9Q9NPC2 374 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 NKIRAS1Q9NYS0 192 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 ASIC3Q9UHC3 531 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 CORO1CQ9ULV4 474 aaPredicted RBP9.04□□□□□ -0.96
VPS50-208ENST00000458707 SYNPO2Q9UMS6 1093 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 NAALADL1Q9UQQ1 740 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 STARD13Q9Y3M8 1113 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 ATRNL1Q5VV63 1379 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 FAM170AA1A519 330 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 K7ENM7 598 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 THAP12O43422 761 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 RAD21O60216 631 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 GRIN3BO60391 1043 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 GAS7O60861 476 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 LUC7L3O95232 432 aaKnown RBP9.04□□□□□ -0.96
VPS50-208ENST00000458707 CETPP11597 493 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 CYP11B1P15538 503 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 GNAZP19086 355 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 FOXN2P32314 431 aa9.04□□□□□ -0.96
VPS50-208ENST00000458707 MFAP3P55082 362 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms