RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 CD320Q9NPF0 282 aa20.33■□□□□ 0.85
USP39-209ENST00000458268 MAN1C1Q9NR34 630 aa20.33■□□□□ 0.85
USP39-209ENST00000458268 TSHZ2Q9NRE2 1034 aa20.33■□□□□ 0.85
USP39-209ENST00000458268 DZANK1Q9NVP4 752 aa20.33■□□□□ 0.85
USP39-209ENST00000458268 FRMD3A2A2Y4 597 aa20.32■□□□□ 0.84
USP39-209ENST00000458268 TRAPPC3O43617 180 aa20.32■□□□□ 0.84
USP39-209ENST00000458268 LILRB3O75022 631 aa20.32■□□□□ 0.84
USP39-209ENST00000458268 PPP1R37O75864 691 aa20.32■□□□□ 0.84
USP39-209ENST00000458268 TKTP29401 623 aaKnown RBP20.32■□□□□ 0.84
USP39-209ENST00000458268 ALCAMQ13740 583 aa20.32■□□□□ 0.84
USP39-209ENST00000458268 FAM26FQ5R3K3 315 aa20.32■□□□□ 0.84
USP39-209ENST00000458268 JADE1Q6IE81 842 aa20.32■□□□□ 0.84
USP39-209ENST00000458268 TMEM184AQ6ZMB5 413 aa20.32■□□□□ 0.84
USP39-209ENST00000458268 NELFCDQ8IXH7 590 aa20.32■□□□□ 0.84
USP39-209ENST00000458268 C7orf25Q9BPX7 421 aa20.32■□□□□ 0.84
USP39-209ENST00000458268 FAM213AQ9BRX8 229 aa20.32■□□□□ 0.84
USP39-209ENST00000458268 CHST7Q9NS84 486 aa20.32■□□□□ 0.84
USP39-209ENST00000458268 TTC26A0AVF1 554 aa20.31■□□□□ 0.84
USP39-209ENST00000458268 HOXB8P17481 243 aaPredicted RBP20.31■□□□□ 0.84
USP39-209ENST00000458268 CMA1P23946 247 aa20.31■□□□□ 0.84
USP39-209ENST00000458268 SYKP43405 635 aa20.31■□□□□ 0.84
USP39-209ENST00000458268 ZP2Q05996 745 aa20.31■□□□□ 0.84
USP39-209ENST00000458268 ARMCX5Q6P1M9 558 aa20.31■□□□□ 0.84
USP39-209ENST00000458268 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.31■□□□□ 0.84
USP39-209ENST00000458268 UNC13DQ70J99 1090 aa20.31■□□□□ 0.84
USP39-209ENST00000458268 ADHFE1Q8IWW8 467 aa20.31■□□□□ 0.84
USP39-209ENST00000458268 PLEKHA5Q9HAU0 1116 aa20.31■□□□□ 0.84
USP39-209ENST00000458268 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.31■□□□□ 0.84
USP39-209ENST00000458268 CPSF3Q9UKF6 684 aaKnown RBP20.31■□□□□ 0.84
USP39-209ENST00000458268 UBQLN1Q9UMX0 589 aaKnown RBP20.31■□□□□ 0.84
USP39-209ENST00000458268 VCANP13611 3396 aa20.31■□□□□ 0.84
USP39-209ENST00000458268 GOLGA6L4A6NEF3 574 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 XPOTO43592 962 aaKnown RBP20.3■□□□□ 0.84
USP39-209ENST00000458268 ACTN4O43707 911 aaKnown RBP20.3■□□□□ 0.84
USP39-209ENST00000458268 FAM189A1O60320 539 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 EFEMP2O95967 443 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 NFICP08651 508 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 NDUFA8P51970 172 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 ARPP19P56211 112 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 CREMQ03060 361 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 CBX2Q14781 532 aaPredicted RBP20.3■□□□□ 0.84
USP39-209ENST00000458268 TMEM132DQ14C87 1099 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 POSTNQ15063 836 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 ZSWIM2Q8NEG5 633 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 BEST2Q8NFU1 509 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 FEZF2Q8TBJ5 459 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 KCNN1Q92952 543 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 POP1Q99575 1024 aaKnown RBP20.3■□□□□ 0.84
USP39-209ENST00000458268 CBWD1Q9BRT8 395 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 STRA6Q9BX79 667 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 S1PR5Q9H228 398 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 TMEM206Q9H813 350 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 SFXN1Q9H9B4 322 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 RXFP1Q9HBX9 757 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 SLC39A2Q9NP94 309 aa20.3■□□□□ 0.84
USP39-209ENST00000458268 C2orf16Q68DN1 1984 aa20.29■□□□□ 0.84
USP39-209ENST00000458268 TMEM189-UBE2V1I3L0A0 370 aa20.29■□□□□ 0.84
USP39-209ENST00000458268 SLFN14P0C7P3 912 aa20.29■□□□□ 0.84
USP39-209ENST00000458268 ADSSP30520 456 aa20.29■□□□□ 0.84
USP39-209ENST00000458268 RPL9P32969 192 aaKnown RBP20.29■□□□□ 0.84
USP39-209ENST00000458268 ELMSAN1Q6PJG2 1045 aa20.29■□□□□ 0.84
USP39-209ENST00000458268 LNX1Q8TBB1 728 aaPredicted RBP20.29■□□□□ 0.84
USP39-209ENST00000458268 PIK3R5Q8WYR1 880 aa20.29■□□□□ 0.84
USP39-209ENST00000458268 PAGE5Q96GU1 130 aa20.29■□□□□ 0.84
USP39-209ENST00000458268 GOLPH3LQ9H4A5 285 aa20.29■□□□□ 0.84
USP39-209ENST00000458268 EXOC1Q9NV70 894 aa20.29■□□□□ 0.84
USP39-209ENST00000458268 PRKAG3Q9UGI9 489 aa20.29■□□□□ 0.84
USP39-209ENST00000458268 NCOR1O75376 2440 aa20.29■□□□□ 0.84
USP39-209ENST00000458268 MTCL1Q9Y4B5 1905 aaKnown RBP20.29■□□□□ 0.84
USP39-209ENST00000458268 ADAM12O43184 909 aa20.28■□□□□ 0.84
USP39-209ENST00000458268 TGM5O43548 720 aa20.28■□□□□ 0.84
USP39-209ENST00000458268 RFPL2O75678 378 aa20.28■□□□□ 0.84
USP39-209ENST00000458268 OR1D2P34982 312 aa20.28■□□□□ 0.84
USP39-209ENST00000458268 ITIH3Q06033 890 aa20.28■□□□□ 0.84
USP39-209ENST00000458268 CD300LGQ6UXG3 332 aa20.28■□□□□ 0.84
USP39-209ENST00000458268 RIPOR3Q96MK2 946 aa20.28■□□□□ 0.84
USP39-209ENST00000458268 PHF7Q9BWX1 381 aaPredicted RBP20.28■□□□□ 0.84
USP39-209ENST00000458268 ADAM7Q9H2U9 754 aa20.28■□□□□ 0.84
USP39-209ENST00000458268 POMKQ9H5K3 350 aa20.28■□□□□ 0.84
USP39-209ENST00000458268 FNIP2Q9P278 1114 aa20.28■□□□□ 0.84
USP39-209ENST00000458268 CDY1Q9Y6F8 540 aa20.28■□□□□ 0.84
USP39-209ENST00000458268 STYXL1Q9Y6J8 313 aa20.28■□□□□ 0.84
USP39-209ENST00000458268 PPEF2O14830 753 aa20.27■□□□□ 0.84
USP39-209ENST00000458268 FGFR3P22607 806 aa20.27■□□□□ 0.84
USP39-209ENST00000458268 ATAT1Q5SQI0 421 aa20.27■□□□□ 0.84
USP39-209ENST00000458268 PDXDC1Q6P996 788 aa20.27■□□□□ 0.84
USP39-209ENST00000458268 DSTYKQ6XUX3 929 aa20.27■□□□□ 0.84
USP39-209ENST00000458268 CD302Q8IX05 232 aa20.27■□□□□ 0.84
USP39-209ENST00000458268 KREMEN2Q8NCW0 462 aa20.27■□□□□ 0.84
USP39-209ENST00000458268 KHSRPQ92945 711 aaKnown RBP eCLIP20.27■□□□□ 0.84
USP39-209ENST00000458268 CLSTN3Q9BQT9 956 aa20.27■□□□□ 0.84
USP39-209ENST00000458268 PIDD1Q9HB75 910 aa20.27■□□□□ 0.84
USP39-209ENST00000458268 RBAKQ9NYW8 714 aaPredicted RBP20.27■□□□□ 0.84
USP39-209ENST00000458268 HPSEQ9Y251 543 aa20.27■□□□□ 0.84
USP39-209ENST00000458268 TIMM13Q9Y5L4 95 aaPredicted RBP20.27■□□□□ 0.84
USP39-209ENST00000458268 CLIC2O15247 247 aa20.26■□□□□ 0.83
USP39-209ENST00000458268 PRR29P0C7W0 189 aa20.26■□□□□ 0.83
USP39-209ENST00000458268 GARTP22102 1010 aa20.26■□□□□ 0.83
USP39-209ENST00000458268 MTHFRP42898 656 aa20.26■□□□□ 0.83
USP39-209ENST00000458268 CYP2J2P51589 502 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms