RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 IGLV3-22A0A075B6J6 115 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 A0A0B4J203 849 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 RASA4BC9J798 803 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 F8VZ95 297 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 H0YGN5 161 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 NEFHP12036 1026 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 MYCLP1P12525 358 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-207ENST00000458046 SOX5P35711 763 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 FMO5P49326 533 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 NEK2P51955 445 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 GTF2A2P52657 109 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 PTGISQ16647 500 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 ARMC4Q5T2S8 1044 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 SWSAP1Q6NVH7 229 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 HIBCHQ6NVY1 386 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-207ENST00000458046 XRRA1Q6P2D8 792 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 FIP1L1Q6UN15 594 aaKnown RBP12.6□□□□□ -0.39
SYNE2-207ENST00000458046 C1orf186Q6ZWK4 172 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 MAEAQ7L5Y9 396 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 OTOP3Q7RTS5 596 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 PLPP7Q8NBV4 271 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 MGARPQ8TDB4 240 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 PARVGQ9HBI0 331 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 OLFML3Q9NRN5 406 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 TAS2R14Q9NYV8 317 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 SIRPGQ9P1W8 387 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 NFS1Q9Y697 457 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 TRIM64A6NGJ6 449 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 TRIM64BA6NI03 449 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 E7EVH7 732 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 PPP1R12BO60237 982 aaPredicted RBP12.59□□□□□ -0.39
SYNE2-207ENST00000458046 NPR1P16066 1061 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 GAP43P17677 238 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 BTF3P20290 206 aaKnown RBP12.59□□□□□ -0.39
SYNE2-207ENST00000458046 ZNF844Q08AG5 666 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 ODF2Q5BJF6 829 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 SLC27A3Q5K4L6 730 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 FBXW10Q5XX13 1052 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 MCTP2Q6DN12 878 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 SYCE1Q8N0S2 351 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 SLC30A5Q8TAD4 765 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 ZNF473Q8WTR7 871 aaKnown RBP12.59□□□□□ -0.39
SYNE2-207ENST00000458046 KAT2BQ92831 832 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 LRRC45Q96CN5 670 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 HES6Q96HZ4 224 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 GMCL1Q96IK5 515 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 CCT8L2Q96SF2 557 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 TRIM51Q9BSJ1 452 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 WRAP73Q9P2S5 460 aaPredicted RBP12.59□□□□□ -0.39
SYNE2-207ENST00000458046 RTCAO00442 366 aaKnown RBP12.59□□□□□ -0.39
SYNE2-207ENST00000458046 LRRN2O75325 713 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 TMOD1P28289 359 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 FAM117BQ6P1L5 589 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 B4GALNT4Q76KP1 1039 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 CATSPER4Q7RTX7 472 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 NLRP14Q86W24 1093 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 PALB2Q86YC2 1186 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 FAM178BQ8IXR5 827 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 RASGEF1CQ8N431 466 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 KLHL23Q8NBE8 558 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 GMCL1P1Q8NEA9 526 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 CCDC26Q8TAB7 109 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 ARHGEF26Q96DR7 871 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 IDI2Q9BXS1 227 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 STK33Q9BYT3 514 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 LRRC4CQ9HCJ2 640 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 LY75O60449 1722 aa12.59□□□□□ -0.39
SYNE2-207ENST00000458046 A0A0A6YYK5 440 aaPredicted RBP12.58□□□□□ -0.4
SYNE2-207ENST00000458046 CCDC188H7C350 402 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 MYO1FO00160 1098 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 FOXN3O00409 490 aaPredicted RBP12.58□□□□□ -0.4
SYNE2-207ENST00000458046 ALDH1B1P30837 517 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 ZNF720Q7Z2F6 126 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 OLIG1Q8TAK6 271 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 CTNNBL1Q8WYA6 563 aaPredicted RBP12.58□□□□□ -0.4
SYNE2-207ENST00000458046 MCOLN1Q9GZU1 580 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 THAP2Q9H0W7 228 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 EFCC1Q9HA90 598 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 KCTD5Q9NXV2 234 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 FAM50BQ9Y247 325 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 BHMG1C9JSJ3 638 aaPredicted RBP12.58□□□□□ -0.4
SYNE2-207ENST00000458046 BACH1O14867 736 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 SPTLC1O15269 473 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 CYP3A4P08684 503 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 CAPN3P20807 821 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 PFKPQ01813 784 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 DHX9Q08211 1270 aaKnown RBP12.58□□□□□ -0.4
SYNE2-207ENST00000458046 KIAA1755Q5JYT7 1200 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 EMC10Q5UCC4 262 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 DCAF12L1Q5VU92 463 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 HS2ST1Q7LGA3 356 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 ANKMY2Q8IV38 441 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.58□□□□□ -0.4
SYNE2-207ENST00000458046 HOOK2Q96ED9 719 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 GPR88Q9GZN0 384 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 INTS2Q9H0H0 1204 aaKnown RBP12.58□□□□□ -0.4
SYNE2-207ENST00000458046 AGPAT3Q9NRZ7 376 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 SEL1LQ9UBV2 794 aa12.58□□□□□ -0.4
SYNE2-207ENST00000458046 CHORDC1Q9UHD1 332 aaPredicted RBP12.58□□□□□ -0.4
SYNE2-207ENST00000458046 DCDC2CA8MYV0 355 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms