RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 TSPAN18Q96SJ8 248 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 FAM213AQ9BRX8 229 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 GTPBP4Q9BZE4 634 aaKnown RBP10.93□□□□□ -0.66
ATG4A-206ENST00000457035 ASB7Q9H672 318 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 LMCD1Q9NZU5 365 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 CACNG4Q9UBN1 327 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 TRAF3IP3Q9Y228 551 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 MTCH2Q9Y6C9 303 aa10.93□□□□□ -0.66
ATG4A-206ENST00000457035 CASTOR2A6NHX0 329 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 PPP1R3GB7ZBB8 358 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 F8W810 466 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 TNFRSF10AO00220 468 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 IGFBP6P24592 240 aaPredicted RBP10.92□□□□□ -0.66
ATG4A-206ENST00000457035 PPM1AP35813 382 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 OR1G1P47890 313 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 ERVFC1P60507 584 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 UBE3AQ05086 875 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 MYBPC2Q14324 1141 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 NFIL3Q16649 462 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 UPP1Q16831 310 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 ZCWPW2Q504Y3 356 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 CENPPQ6IPU0 288 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 DDX53Q86TM3 631 aaKnown RBP10.92□□□□□ -0.66
ATG4A-206ENST00000457035 CBWD2Q8IUF1 395 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 BRSK2Q8IWQ3 736 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 ADSSL1Q8N142 457 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 XXYLT1Q8NBI6 393 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 GOLGA5Q8TBA6 731 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 RABGGTAQ92696 567 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 C18orf25Q96B23 403 aaPredicted RBP10.92□□□□□ -0.66
ATG4A-206ENST00000457035 COLEC11Q9BWP8 271 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 VN1R3Q9BXE9 311 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 LMAN2LQ9H0V9 348 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 KIAA1586Q9HCI6 787 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 PLSCR2Q9NRY7 297 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 SLC38A7Q9NVC3 462 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 MARCH5Q9NX47 278 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 LZTS1Q9Y250 596 aa10.92□□□□□ -0.66
ATG4A-206ENST00000457035 ZNF233A6NK53 670 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 BIN1O00499 593 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 CALUO43852 315 aaPredicted RBP10.91□□□□□ -0.66
ATG4A-206ENST00000457035 CYP3A5P20815 502 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 CYP2J2P51589 502 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 CLCNKBP51801 687 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 KRT17Q04695 432 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 PPP2R3AQ06190 1150 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 SKIV2LQ15477 1246 aaKnown RBP10.91□□□□□ -0.66
ATG4A-206ENST00000457035 SPATA1Q5VX52 437 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 JADE1Q6IE81 842 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 DCLRE1AQ6PJP8 1040 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 RNF168Q8IYW5 571 aaPredicted RBP10.91□□□□□ -0.66
ATG4A-206ENST00000457035 TMEM130Q8N3G9 435 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 RDH13Q8NBN7 331 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 ADAMTS19Q8TE59 1207 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 ATXN2LQ8WWM7 1075 aaKnown RBP10.91□□□□□ -0.66
ATG4A-206ENST00000457035 MRPL38Q96DV4 380 aaKnown RBP10.91□□□□□ -0.66
ATG4A-206ENST00000457035 TMEM169Q96HH4 297 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 MFSD14AQ96MC6 490 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 ASB2Q96Q27 587 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 NUP62CLQ9H1M0 184 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 GOLGA2P5Q9HBQ8 144 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 PUF60Q9UHX1 559 aaKnown RBP10.91□□□□□ -0.66
ATG4A-206ENST00000457035 UBQLN1Q9UMX0 589 aaKnown RBP10.91□□□□□ -0.66
ATG4A-206ENST00000457035 PRG3Q9Y2Y8 225 aaPredicted RBP10.91□□□□□ -0.66
ATG4A-206ENST00000457035 DERAQ9Y315 318 aa10.91□□□□□ -0.66
ATG4A-206ENST00000457035 MTCL1Q9Y4B5 1905 aaKnown RBP10.91□□□□□ -0.66
ATG4A-206ENST00000457035 TMEM189-UBE2V1I3L0A0 370 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 FSCN2O14926 492 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 EXOC3O60645 756 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 IL18RAPO95256 599 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 NR3C1P04150 777 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 NFICP08651 508 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 LRPAP1P30533 357 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 RPL9P32969 192 aaKnown RBP10.9□□□□□ -0.66
ATG4A-206ENST00000457035 IRS1P35568 1242 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 CASP4P49662 377 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 PMS1P54277 932 aaKnown RBP10.9□□□□□ -0.66
ATG4A-206ENST00000457035 MCCD1P59942 119 aaPredicted RBP10.9□□□□□ -0.66
ATG4A-206ENST00000457035 MRPS5P82675 430 aaKnown RBP10.9□□□□□ -0.66
ATG4A-206ENST00000457035 ADAM9Q13443 819 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 HSP90AA2PQ14568 343 aaPredicted RBP10.9□□□□□ -0.66
ATG4A-206ENST00000457035 SNRNP35Q16560 246 aaKnown RBP10.9□□□□□ -0.66
ATG4A-206ENST00000457035 PTPROQ16827 1216 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 VARS2Q5ST30 1063 aaKnown RBP10.9□□□□□ -0.66
ATG4A-206ENST00000457035 ANKRD40Q6AI12 368 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 RBM43Q6ZSC3 357 aaKnown RBP10.9□□□□□ -0.66
ATG4A-206ENST00000457035 TAS1R1Q7RTX1 841 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 NT5DC4Q86YG4 428 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 EFCAB13Q8IY85 973 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 TRIML1Q8N9V2 468 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 DDX27Q96GQ7 796 aaKnown RBP10.9□□□□□ -0.66
ATG4A-206ENST00000457035 DHTKD1Q96HY7 919 aaPredicted RBP10.9□□□□□ -0.66
ATG4A-206ENST00000457035 UROC1Q96N76 676 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 GPR62Q9BZJ7 368 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 GZF1Q9H116 711 aaPredicted RBP10.9□□□□□ -0.66
ATG4A-206ENST00000457035 PDE11AQ9HCR9 933 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 RBAKQ9NYW8 714 aaPredicted RBP10.9□□□□□ -0.66
ATG4A-206ENST00000457035 TUBGCP4Q9UGJ1 667 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 ADAM28Q9UKQ2 775 aa10.9□□□□□ -0.66
ATG4A-206ENST00000457035 C2CD2Q9Y426 696 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms