RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 SCARA3Q6AZY7 606 aa20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 KLHL10Q6JEL2 608 aa20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 RDH13Q8NBN7 331 aa20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 PARD3BQ8TEW8 1205 aa20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 FAM84AQ96KN4 292 aa20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 UROC1Q96N76 676 aa20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 FAM193BQ96PV7 902 aaPredicted RBP20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 FUCA2Q9BTY2 467 aa20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 C11orf84Q9BUA3 381 aaPredicted RBP20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 MTMR10Q9NXD2 777 aa20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 SPG21Q9NZD8 308 aa20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 RWDD2AQ9UIY3 292 aa20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 LZTS1Q9Y250 596 aa20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 FAN1Q9Y2M0 1017 aa20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.21■□□□□ 0.83
SBDSP1-205ENST00000456312 EYSQ5T1H1 3165 aa20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 PLXNA3P51805 1871 aa20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 ALDH2P05091 517 aa20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 RPL13P26373 211 aaKnown RBP20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 OR1G1P47890 313 aa20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 ENPEPQ07075 957 aa20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 GPM6BQ13491 265 aa20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 HSP90AA2PQ14568 343 aaPredicted RBP20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 SURF1Q15526 300 aa20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 OR5B17Q8NGF7 314 aa20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 ZNF516Q92618 1163 aa20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 RABGGTAQ92696 567 aa20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 FAM212AQ96EL1 285 aa20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 CGRRF1Q99675 332 aa20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 PRDM12Q9H4Q4 367 aa20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 ALG13Q9NP73 1137 aaKnown RBP20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 INTS13Q9NVM9 706 aa20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 PRG3Q9Y2Y8 225 aaPredicted RBP20.2■□□□□ 0.82
SBDSP1-205ENST00000456312 PPEF2O14830 753 aa20.19■□□□□ 0.82
SBDSP1-205ENST00000456312 RPL9P32969 192 aaKnown RBP20.19■□□□□ 0.82
SBDSP1-205ENST00000456312 STX17P56962 302 aa20.19■□□□□ 0.82
SBDSP1-205ENST00000456312 UBE3AQ05086 875 aa20.19■□□□□ 0.82
SBDSP1-205ENST00000456312 CT47A1Q5JQC4 288 aaPredicted RBP20.19■□□□□ 0.82
SBDSP1-205ENST00000456312 WDR49Q8IV35 697 aa20.19■□□□□ 0.82
SBDSP1-205ENST00000456312 DEFB123Q8N688 67 aa20.19■□□□□ 0.82
SBDSP1-205ENST00000456312 C1orf127Q8N9H9 656 aa20.19■□□□□ 0.82
SBDSP1-205ENST00000456312 TMC2Q8TDI7 906 aa20.19■□□□□ 0.82
SBDSP1-205ENST00000456312 EEF2KMTQ96G04 330 aa20.19■□□□□ 0.82
SBDSP1-205ENST00000456312 FAM161BQ96MY7 647 aa20.19■□□□□ 0.82
SBDSP1-205ENST00000456312 TSG101Q99816 390 aa20.19■□□□□ 0.82
SBDSP1-205ENST00000456312 BICDL2A1A5D9 508 aa20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 LRRIQ3A6PVS8 624 aaPredicted RBP20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 PODXLO00592 558 aa20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 PIRO00625 290 aa20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 FSCN2O14926 492 aa20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 CETN3O15182 167 aa20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 SLC16A3O15427 465 aaKnown RBP20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 ERCC5P28715 1186 aaPredicted RBP20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 PSMC2P35998 433 aaKnown RBP20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 AARSP49588 968 aaKnown RBP eCLIP20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 DLG4P78352 724 aa20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 SKOR2Q2VWA4 1001 aaPredicted RBP20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 CEP135Q66GS9 1140 aa20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 LMBRD2Q68DH5 695 aaPredicted RBP20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 DCLRE1AQ6PJP8 1040 aa20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 DDX53Q86TM3 631 aaKnown RBP20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 NOC3LQ8WTT2 800 aaKnown RBP20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 POF1BQ8WVV4 589 aa20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 SYAP1Q96A49 352 aaPredicted RBP20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 DDX27Q96GQ7 796 aaKnown RBP20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 CEP63Q96MT8 703 aa20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 POP1Q99575 1024 aaKnown RBP20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 LMAN2LQ9H0V9 348 aa20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 SIX4Q9UIU6 781 aa20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 ADAM28Q9UKQ2 775 aa20.18■□□□□ 0.82
SBDSP1-205ENST00000456312 XPOTO43592 962 aaKnown RBP20.17■□□□□ 0.82
SBDSP1-205ENST00000456312 C9orf57Q5W0N0 161 aa20.17■□□□□ 0.82
SBDSP1-205ENST00000456312 FUT10Q6P4F1 479 aa20.17■□□□□ 0.82
SBDSP1-205ENST00000456312 C15orf39Q6ZRI6 1047 aa20.17■□□□□ 0.82
SBDSP1-205ENST00000456312 C11orf57Q6ZUT1 292 aaPredicted RBP20.17■□□□□ 0.82
SBDSP1-205ENST00000456312 FAM186BQ8IYM0 893 aa20.17■□□□□ 0.82
SBDSP1-205ENST00000456312 BEST2Q8NFU1 509 aa20.17■□□□□ 0.82
SBDSP1-205ENST00000456312 TMEM169Q96HH4 297 aa20.17■□□□□ 0.82
SBDSP1-205ENST00000456312 CDX2Q99626 313 aaPredicted RBP20.17■□□□□ 0.82
SBDSP1-205ENST00000456312 COLEC11Q9BWP8 271 aa20.17■□□□□ 0.82
SBDSP1-205ENST00000456312 GPR62Q9BZJ7 368 aa20.17■□□□□ 0.82
SBDSP1-205ENST00000456312 MTMR12Q9C0I1 747 aa20.17■□□□□ 0.82
SBDSP1-205ENST00000456312 ZBP1Q9H171 429 aa20.17■□□□□ 0.82
SBDSP1-205ENST00000456312 FRMD4BQ9Y2L6 1034 aa20.17■□□□□ 0.82
SBDSP1-205ENST00000456312 SPTBN5Q9NRC6 3674 aaKnown RBP20.16■□□□□ 0.82
SBDSP1-205ENST00000456312 IRS1P35568 1242 aa20.16■□□□□ 0.82
SBDSP1-205ENST00000456312 MARSP56192 900 aaKnown RBP20.16■□□□□ 0.82
SBDSP1-205ENST00000456312 ERVFC1P60507 584 aa20.16■□□□□ 0.82
SBDSP1-205ENST00000456312 TYRO3Q06418 890 aa20.16■□□□□ 0.82
SBDSP1-205ENST00000456312 BFSP1Q12934 665 aa20.16■□□□□ 0.82
SBDSP1-205ENST00000456312 INTS8Q75QN2 995 aaKnown RBP20.16■□□□□ 0.82
SBDSP1-205ENST00000456312 FILIP1Q7Z7B0 1213 aa20.16■□□□□ 0.82
SBDSP1-205ENST00000456312 IRF2BP1Q8IU81 584 aa20.16■□□□□ 0.82
SBDSP1-205ENST00000456312 CCDC127Q96BQ5 260 aa20.16■□□□□ 0.82
SBDSP1-205ENST00000456312 HERC2P3Q9BVR0 1158 aa20.16■□□□□ 0.82
SBDSP1-205ENST00000456312 CHST7Q9NS84 486 aa20.16■□□□□ 0.82
SBDSP1-205ENST00000456312 DPP3Q9NY33 737 aa20.16■□□□□ 0.82
SBDSP1-205ENST00000456312 LMCD1Q9NZU5 365 aa20.16■□□□□ 0.82
SBDSP1-205ENST00000456312 LILRB3O75022 631 aa20.15■□□□□ 0.82
SBDSP1-205ENST00000456312 B3GAT3O94766 335 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms