RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 CD302Q8IX05 232 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 EFCAB13Q8IY85 973 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 GPD1LQ8N335 351 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 ENGASEQ8NFI3 743 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 BEST2Q8NFU1 509 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 SMARCE1Q969G3 411 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 B3GALT6Q96L58 329 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 GBP4Q96PP9 640 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 EMILIN2Q9BXX0 1053 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 GPR62Q9BZJ7 368 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 PCIF1Q9H4Z3 704 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 IGFLR1Q9H665 355 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 MRPL17Q9NRX2 175 aaKnown RBP7.67□□□□□ -1.18
COMMD1-205ENST00000455659 RMND1Q9NWS8 449 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 HSPBP1Q9NZL4 362 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 BARX2Q9UMQ3 279 aaPredicted RBP7.67□□□□□ -1.18
COMMD1-205ENST00000455659 COG5Q9UP83 839 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 C2CD2Q9Y426 696 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 NUB1Q9Y5A7 615 aa7.67□□□□□ -1.18
COMMD1-205ENST00000455659 SPDYE4A6NLX3 237 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 H3BQ06 376 aaPredicted RBP7.66□□□□□ -1.18
COMMD1-205ENST00000455659 I3L4J1 428 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 CLIC2O15247 247 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 LINC01565O15544 149 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 TGFB1I1O43294 461 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 NCK2O43639 380 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 KIF20AO95235 890 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 SMC2O95347 1197 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 LDHAP00338 332 aaKnown RBP7.66□□□□□ -1.18
COMMD1-205ENST00000455659 LRPAP1P30533 357 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 WNT7BP56706 349 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 RBM10P98175 930 aaKnown RBP7.66□□□□□ -1.18
COMMD1-205ENST00000455659 DSG1Q02413 1049 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 CREMQ03060 361 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 PSMD2Q13200 908 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 COL19A1Q14993 1142 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 CLUL1Q15846 466 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 PSMD5Q16401 504 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 SNRNP35Q16560 246 aaKnown RBP7.66□□□□□ -1.18
COMMD1-205ENST00000455659 AAK1Q2M2I8 961 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 USP41Q3LFD5 358 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 RTP2Q5QGT7 225 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 FAM171A1Q5VUB5 890 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 CRELD2Q6UXH1 353 aaPredicted RBP7.66□□□□□ -1.18
COMMD1-205ENST00000455659 CBWD2Q8IUF1 395 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 SMYD4Q8IYR2 804 aaPredicted RBP7.66□□□□□ -1.18
COMMD1-205ENST00000455659 TMEM130Q8N3G9 435 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 EFHBQ8N7U6 833 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 MRPL43Q8N983 215 aaKnown RBP7.66□□□□□ -1.18
COMMD1-205ENST00000455659 ZSWIM2Q8NEG5 633 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 VN1R2Q8NFZ6 395 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 ZNF507Q8TCN5 953 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 RIN2Q8WYP3 895 aaPredicted RBP7.66□□□□□ -1.18
COMMD1-205ENST00000455659 CASP10Q92851 521 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 ERCC4Q92889 916 aaPredicted RBP7.66□□□□□ -1.18
COMMD1-205ENST00000455659 DDX27Q96GQ7 796 aaKnown RBP7.66□□□□□ -1.18
COMMD1-205ENST00000455659 ZNF560Q96MR9 790 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 TIGD1Q96MW7 591 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 TSPAN18Q96SJ8 248 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 TTPALQ9BTX7 342 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 MTMR12Q9C0I1 747 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 ASB7Q9H672 318 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.66□□□□□ -1.18
COMMD1-205ENST00000455659 CGNQ9P2M7 1197 aaKnown RBP7.66□□□□□ -1.18
COMMD1-205ENST00000455659 SSX2IPQ9Y2D8 614 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 DERAQ9Y315 318 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 HCFC2Q9Y5Z7 792 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 IRAK3Q9Y616 596 aa7.66□□□□□ -1.18
COMMD1-205ENST00000455659 ZNF233A6NK53 670 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 GOLGA6L22H0YM25 854 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 PPEF2O14830 753 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 TEX28O15482 410 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 TRAPPC3O43617 180 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 CALUO43852 315 aaPredicted RBP7.65□□□□□ -1.18
COMMD1-205ENST00000455659 EXOC3O60645 756 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 CLASP2O75122 1294 aaKnown RBP7.65□□□□□ -1.18
COMMD1-205ENST00000455659 CXCL14O95715 111 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 EFEMP2O95967 443 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 GLUD1P00367 558 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 NR3C1P04150 777 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 ADRB2P07550 413 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 CNPP09543 421 aaKnown RBP7.65□□□□□ -1.18
COMMD1-205ENST00000455659 TMEM191BP0C7N4 346 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 DLATP10515 647 aaKnown RBP7.65□□□□□ -1.18
COMMD1-205ENST00000455659 CYP3A5P20815 502 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 TKTP29401 623 aaKnown RBP7.65□□□□□ -1.18
COMMD1-205ENST00000455659 RPL9P32969 192 aaKnown RBP7.65□□□□□ -1.18
COMMD1-205ENST00000455659 BRCC3P46736 316 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 KCNQ1P51787 676 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 SNRPFP62306 86 aaKnown RBP7.65□□□□□ -1.18
COMMD1-205ENST00000455659 MRPS5P82675 430 aaKnown RBP7.65□□□□□ -1.18
COMMD1-205ENST00000455659 TFAMQ00059 246 aaKnown RBP7.65□□□□□ -1.18
COMMD1-205ENST00000455659 POU5F1Q01860 360 aaKnown RBP7.65□□□□□ -1.18
COMMD1-205ENST00000455659 DLX2Q07687 328 aaPredicted RBP7.65□□□□□ -1.18
COMMD1-205ENST00000455659 PTPRJQ12913 1337 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 CTC1Q2NKJ3 1217 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 TJAP1Q5JTD0 557 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 SPATA1Q5VX52 437 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 PDXDC1Q6P996 788 aa7.65□□□□□ -1.18
COMMD1-205ENST00000455659 DCLRE1AQ6PJP8 1040 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms