RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 KCNG1Q9UIX4 513 aa20.24■□□□□ 0.83
UBE2D4-208ENST00000454350 FAM186AA6NE01 2351 aa20.24■□□□□ 0.83
UBE2D4-208ENST00000454350 MIA3Q5JRA6 1907 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 CACNA1IQ9P0X4 2223 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 COL4A3Q01955 1670 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 TRAPPC3O43617 180 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 FAM189A1O60320 539 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 ABLIM3O94929 683 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 CFHP08603 1231 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 SRFP11831 508 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 HARSP12081 509 aaKnown RBP20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 RPL9P32969 192 aaKnown RBP20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 SCN1AP35498 2009 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 ZNF131P52739 623 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 SMTNP53814 917 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 ROR1Q01973 937 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 STRN3Q13033 797 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 VARS2Q5ST30 1063 aaKnown RBP20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 POTEHQ6S545 545 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 RTL10Q7L3V2 364 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 BRAPQ7Z569 592 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 FLCNQ8NFG4 579 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 ITFG1Q8TB96 612 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 FGF14Q92915 247 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 CDK5RAP3Q96JB5 506 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 FIZ1Q96SL8 496 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 MFSD1Q9H3U5 465 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 DNMT3BQ9UBC3 853 aaKnown RBP20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 CDH7Q9ULB5 785 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 ODF2LQ9ULJ1 636 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 ZFP37Q9Y6Q3 630 aaPredicted RBP20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 NUMBLQ9Y6R0 609 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 CFAP54Q96N23 3096 aa20.23■□□□□ 0.83
UBE2D4-208ENST00000454350 PTPRZ1P23471 2315 aaPredicted RBP20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 TTC26A0AVF1 554 aa20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 WDR27A2RRH5 827 aa20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 SYN3O14994 580 aa20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 CXCL8P10145 99 aa20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 SF3A1Q15459 793 aaKnown RBP20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 ZBTB6Q15916 424 aa20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 HAUS6Q7Z4H7 955 aa20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 FGF13Q92913 245 aa20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 SUSD3Q96L08 255 aa20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 LARSQ9P2J5 1176 aaKnown RBP20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 TUBGCP4Q9UGJ1 667 aa20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 FBXL21Q9UKT6 434 aa20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 TSC2P49815 1807 aa20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 FANCMQ8IYD8 2048 aa20.22■□□□□ 0.83
UBE2D4-208ENST00000454350 CLDN3O15551 220 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 PIGRP01833 764 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 PLCG1P19174 1290 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 LONP1P36776 959 aaKnown RBP20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 UBA7P41226 1012 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 TNFSF9P41273 254 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 MCM6Q14566 821 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 KARSQ15046 597 aaKnown RBP20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 PTPAQ15257 358 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 ZBTB41Q5SVQ8 909 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 PARM1Q6UWI2 310 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 GPBP1Q86WP2 473 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 ZNF461Q8TAF7 563 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 GPR152Q8TDT2 470 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 RAD54LQ92698 747 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 ATOH1Q92858 354 aaPredicted RBP20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 IRF2BPLQ9H1B7 796 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 SLC2A4RGQ9NR83 387 aa20.21■□□□□ 0.83
UBE2D4-208ENST00000454350 ARHGEF37A1IGU5 675 aa20.2■□□□□ 0.82
UBE2D4-208ENST00000454350 PROB1E7EW31 1015 aa20.2■□□□□ 0.82
UBE2D4-208ENST00000454350 XYLBO75191 536 aa20.2■□□□□ 0.82
UBE2D4-208ENST00000454350 BMP15O95972 392 aa20.2■□□□□ 0.82
UBE2D4-208ENST00000454350 ADRB2P07550 413 aa20.2■□□□□ 0.82
UBE2D4-208ENST00000454350 SLC39A4Q6P5W5 647 aa20.2■□□□□ 0.82
UBE2D4-208ENST00000454350 USP49Q70CQ1 688 aa20.2■□□□□ 0.82
UBE2D4-208ENST00000454350 CALML4Q96GE6 196 aa20.2■□□□□ 0.82
UBE2D4-208ENST00000454350 PLEKHA5Q9HAU0 1116 aa20.2■□□□□ 0.82
UBE2D4-208ENST00000454350 TBX20Q9UMR3 447 aa20.2■□□□□ 0.82
UBE2D4-208ENST00000454350 POLIQ9UNA4 740 aa20.2■□□□□ 0.82
UBE2D4-208ENST00000454350 SEC24AO95486 1093 aa20.19■□□□□ 0.82
UBE2D4-208ENST00000454350 CLTAP09496 248 aa20.19■□□□□ 0.82
UBE2D4-208ENST00000454350 LRPAP1P30533 357 aa20.19■□□□□ 0.82
UBE2D4-208ENST00000454350 SPAG1Q07617 926 aa20.19■□□□□ 0.82
UBE2D4-208ENST00000454350 DHX8Q14562 1220 aaKnown RBP20.19■□□□□ 0.82
UBE2D4-208ENST00000454350 SLC5A9Q2M3M2 681 aa20.19■□□□□ 0.82
UBE2D4-208ENST00000454350 NPAS3Q8IXF0 933 aa20.19■□□□□ 0.82
UBE2D4-208ENST00000454350 CCDC105Q8IYK2 499 aa20.19■□□□□ 0.82
UBE2D4-208ENST00000454350 CCSER1Q9C0I3 900 aa20.19■□□□□ 0.82
UBE2D4-208ENST00000454350 AVENQ9NQS1 362 aaPredicted RBP20.19■□□□□ 0.82
UBE2D4-208ENST00000454350 FBXL5Q9UKA1 691 aa20.19■□□□□ 0.82
UBE2D4-208ENST00000454350 CA14Q9ULX7 337 aa20.19■□□□□ 0.82
UBE2D4-208ENST00000454350 CLIC4Q9Y696 253 aa20.19■□□□□ 0.82
UBE2D4-208ENST00000454350 TCHHQ07283 1943 aa20.18■□□□□ 0.82
UBE2D4-208ENST00000454350 H0YCG3 227 aa20.18■□□□□ 0.82
UBE2D4-208ENST00000454350 ATF2P15336 505 aa20.18■□□□□ 0.82
UBE2D4-208ENST00000454350 AARSP49588 968 aaKnown RBP eCLIP20.18■□□□□ 0.82
UBE2D4-208ENST00000454350 ENOX2Q16206 610 aaKnown RBP20.18■□□□□ 0.82
UBE2D4-208ENST00000454350 PABPC1LQ4VXU2 614 aaKnown RBP20.18■□□□□ 0.82
UBE2D4-208ENST00000454350 TCEAL8Q8IYN2 117 aa20.18■□□□□ 0.82
UBE2D4-208ENST00000454350 DDX12PQ92771 950 aa20.18■□□□□ 0.82
UBE2D4-208ENST00000454350 EPSTI1Q96J88 318 aa20.18■□□□□ 0.82
UBE2D4-208ENST00000454350 RTP3Q9BQQ7 232 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms