RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 KRI1Q8N9T8 703 aaKnown RBP17.94■□□□□ 0.46
NCKIPSD-208ENST00000454134 FOXD4L4Q8WXT5 416 aaPredicted RBP17.94■□□□□ 0.46
NCKIPSD-208ENST00000454134 KCNN1Q92952 543 aa17.94■□□□□ 0.46
NCKIPSD-208ENST00000454134 PANK2Q9BZ23 570 aa17.94■□□□□ 0.46
NCKIPSD-208ENST00000454134 ZSCAN16Q9H4T2 348 aaPredicted RBP17.94■□□□□ 0.46
NCKIPSD-208ENST00000454134 STK17AQ9UEE5 414 aa17.94■□□□□ 0.46
NCKIPSD-208ENST00000454134 NUB1Q9Y5A7 615 aa17.94■□□□□ 0.46
NCKIPSD-208ENST00000454134 ZNF318Q5VUA4 2279 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 PDCD11Q14690 1871 aaKnown RBP17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 TTC26A0AVF1 554 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 TISP43B9A030 160 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 CCL16O15467 120 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 FAM189A1O60320 539 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 PIGRP01833 764 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 TXLNAP40222 546 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 VCPP55072 806 aaKnown RBP17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 NTHL1P78549 312 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 SLC39A14Q15043 492 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 VARS2Q5ST30 1063 aaKnown RBP17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 AXDND1Q5T1B0 1012 aaPredicted RBP17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 GET4Q7L5D6 327 aaPredicted RBP17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 GRASPQ7Z6J2 395 aaPredicted RBP17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 SFR1Q86XK3 245 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 SLC7A14Q8TBB6 771 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 RSAD2Q8WXG1 361 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 STAMQ92783 540 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 SNX21Q969T3 373 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 KIF12Q96FN5 646 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 IKZF4Q9H2S9 585 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 PLEKHA5Q9HAU0 1116 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 KCNK12Q9HB15 430 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 POLIQ9UNA4 740 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 BACE2Q9Y5Z0 518 aa17.93■□□□□ 0.46
NCKIPSD-208ENST00000454134 A0A087X0B3 334 aa17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 A0A0B4J269 797 aa17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 MYMKA6NI61 221 aa17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 LACTBL1A8MY62 500 aa17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 ANKRD63C9JTQ0 380 aa17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 OGTO15294 1046 aa17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 MCM4P33991 863 aa17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 GUCY2FP51841 1108 aa17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 GTF2BQ00403 316 aa17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 ENOX2Q16206 610 aaKnown RBP17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 ST13P5Q8NFI4 369 aaPredicted RBP17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 DDX12PQ92771 950 aa17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 FAM212AQ96EL1 285 aa17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 MSTO1Q9BUK6 570 aa17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 TFIP11Q9UBB9 837 aaKnown RBP17.92■□□□□ 0.46
NCKIPSD-208ENST00000454134 DOCK6Q96HP0 2047 aa17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 HNRNPA1P09651 372 aaKnown RBP eCLIP17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 SCP2P22307 547 aa17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 ARPP19P56211 112 aa17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 PPP2R3AQ06190 1150 aa17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 TDGQ13569 410 aa17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 STK38Q15208 465 aa17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 ZBTB6Q15916 424 aa17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 SV2BQ7L1I2 683 aa17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 MAP4K3Q8IVH8 894 aa17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 SUSD3Q96L08 255 aa17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 RPF1Q9H9Y2 349 aaKnown RBP17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 TBC1D7Q9P0N9 293 aa17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 MUC6Q6W4X9 2439 aa17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 WDFY4Q6ZS81 3184 aa17.91■□□□□ 0.46
NCKIPSD-208ENST00000454134 SYN3O14994 580 aa17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 NARSO43776 548 aaKnown RBP17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 FSHRP23945 695 aa17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 HOXA9P31269 272 aa17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 STAT6P42226 847 aa17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 NASPP49321 788 aaPredicted RBP17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 ROR1Q01973 937 aa17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 KYAT1Q16773 422 aa17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 CCDC73Q6ZRK6 1079 aa17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 HSCBQ8IWL3 235 aa17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 PDILTQ8N807 584 aa17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 DNAJC19Q96DA6 116 aa17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 HCFC1R1Q9NWW0 138 aa17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 IGSF9Q9P2J2 1179 aa17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 EPS15L1Q9UBC2 864 aa17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 MORC2Q9Y6X9 1032 aaPredicted RBP17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 KMT2EQ8IZD2 1858 aa17.9■□□□□ 0.46
NCKIPSD-208ENST00000454134 DOCK8Q8NF50 2099 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 WDR27A2RRH5 827 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 TBC1D4O60343 1298 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 LAMP2P13473 410 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 AVPR2P30518 371 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 LRPAP1P30533 357 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 ACOT2P49753 483 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 MRPL58Q14197 206 aaKnown RBP17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 FOXD4L6Q3SYB3 417 aaPredicted RBP17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 CTXN3Q4LDR2 81 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 SLC8B1Q6J4K2 584 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 FOXD4L3Q6VB84 417 aaPredicted RBP17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 ZNF720Q7Z2F6 126 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 LINC00301Q8NCQ3 95 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 PRSS33Q8NF86 280 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 KCNH6Q9H252 994 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 ST6GALNAC4Q9H4F1 302 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 MRPL44Q9H9J2 332 aaKnown RBP17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 FBXL5Q9UKA1 691 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms