RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 ARL2P36404 184 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 IRAK1P51617 712 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 STAT5BP51692 787 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 CORO7P57737 925 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 GNGT1P63211 74 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 PDCLQ13371 301 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 CAPSQ13938 189 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 PSMD6Q15008 389 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 ZACNQ401N2 412 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 TMEM63BQ5T3F8 832 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 ACAD10Q6JQN1 1059 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 ZBTB33Q86T24 672 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 ZNF483Q8TF39 744 aaPredicted RBP12.91□□□□□ -0.34
COL27A1-202ENST00000451716 ATP8B4Q8TF62 1192 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 CAPS2Q9BXY5 557 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 GTF3C4Q9UKN8 822 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 PTPN22Q9Y2R2 807 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 PPP2R3BQ9Y5P8 575 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 CPP00450 1065 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 IVLP07476 585 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 PAX3P23760 479 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 NAMPTP43490 491 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 KCNJ1P48048 391 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 CCNHP51946 323 aaPredicted RBP12.9□□□□□ -0.34
COL27A1-202ENST00000451716 GCNT1Q02742 428 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 DHX9Q08211 1270 aaKnown RBP12.9□□□□□ -0.34
COL27A1-202ENST00000451716 CLEC16AQ2KHT3 1053 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 WDR44Q5JSH3 913 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 TTC27Q6P3X3 843 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 LRRC71Q8N4P6 559 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 CD101Q93033 1021 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 MAGOHBQ96A72 148 aaKnown RBP12.9□□□□□ -0.34
COL27A1-202ENST00000451716 CYFIP2Q96F07 1278 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 RMI1Q9H9A7 625 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 TXNRD2Q9NNW7 524 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 ANAPC7Q9UJX3 599 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 DIS3Q9Y2L1 958 aaKnown RBP12.9□□□□□ -0.34
COL27A1-202ENST00000451716 MYPNQ86TC9 1320 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 MIF4GDA9UHW6 222 aaKnown RBP12.9□□□□□ -0.34
COL27A1-202ENST00000451716 SRGAP2CP0DJJ0 459 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 RRM1P23921 792 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 TNFSF9P41273 254 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 PLTPP55058 493 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 HSDL1Q3SXM5 330 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 WDR78Q5VTH9 848 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 TMEM270Q6UE05 265 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 JAMLQ86YT9 394 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 RIOX2Q8IUF8 465 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 SULF1Q8IWU6 871 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 PRPF31Q8WWY3 499 aaKnown RBP12.9□□□□□ -0.34
COL27A1-202ENST00000451716 NAP1L3Q99457 506 aaPredicted RBP12.9□□□□□ -0.34
COL27A1-202ENST00000451716 TRIM6Q9C030 488 aaPredicted RBP12.9□□□□□ -0.34
COL27A1-202ENST00000451716 ATP8A1Q9Y2Q0 1164 aa12.9□□□□□ -0.34
COL27A1-202ENST00000451716 GJB1P08034 283 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 ELF1P32519 619 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 HPDP32754 393 aaPredicted RBP12.89□□□□□ -0.35
COL27A1-202ENST00000451716 NF2P35240 595 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 RWDD2BP57060 319 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 TBC1D25Q3MII6 688 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 TMC3Q7Z5M5 1100 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 RPS6KC1Q96S38 1066 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 ERP44Q9BS26 406 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 TCHPQ9BT92 498 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 IGKV6D-21A0A0A0MT36 114 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 EME2A4GXA9 379 aaPredicted RBP12.89□□□□□ -0.35
COL27A1-202ENST00000451716 H0YCG3 227 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 H0YGN5 161 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 PPFIA2O75334 1257 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 Q3C1V9 767 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 SEL1L2Q5TEA6 688 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 CDR2LQ86X02 465 aaPredicted RBP12.89□□□□□ -0.35
COL27A1-202ENST00000451716 TRAPPC12Q8WVT3 735 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 SEC14L1Q92503 715 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 DCPSQ96C86 337 aaKnown RBP12.89□□□□□ -0.35
COL27A1-202ENST00000451716 NIFKQ9BYG3 293 aaKnown RBP12.89□□□□□ -0.35
COL27A1-202ENST00000451716 ASCC2Q9H1I8 757 aaPredicted RBP12.89□□□□□ -0.35
COL27A1-202ENST00000451716 NUB1Q9Y5A7 615 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 NFS1Q9Y697 457 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 STYXL1Q9Y6J8 313 aa12.89□□□□□ -0.35
COL27A1-202ENST00000451716 A0A0B4J269 797 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 CLDN3O15551 220 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 ZEB2O60315 1214 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 SHOX2O60902 331 aaPredicted RBP12.88□□□□□ -0.35
COL27A1-202ENST00000451716 MTA2O94776 668 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 GJB6O95452 261 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 UNGP13051 313 aaPredicted RBP12.88□□□□□ -0.35
COL27A1-202ENST00000451716 MAPK4P31152 587 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 CLDN10P78369 228 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 GUCY1A3Q02108 690 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 TTLL12Q14166 644 aaPredicted RBP12.88□□□□□ -0.35
COL27A1-202ENST00000451716 TCEAL1Q15170 157 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 TARBP2Q15633 366 aaKnown RBP12.88□□□□□ -0.35
COL27A1-202ENST00000451716 DUPD1Q68J44 220 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 LRRC45Q96CN5 670 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 WNT8AQ9H1J5 351 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 KIAA1586Q9HCI6 787 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 PCDHB4Q9Y5E5 795 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 GRIN2DO15399 1336 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 WDR90Q96KV7 1748 aa12.88□□□□□ -0.35
COL27A1-202ENST00000451716 O00370 1275 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms