RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 TRAPPC3O43617 180 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 C8AP07357 584 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 NMT1P30419 496 aaKnown RBP13.49□□□□□ -0.25
MSH5-209ENST00000450148 AVPR2P30518 371 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 NHLH1Q02575 133 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 SLC8B1Q6J4K2 584 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 ANKS3Q6ZW76 656 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 STAMQ92783 540 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 SUSD3Q96L08 255 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 ST6GALNAC4Q9H4F1 302 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 PLEKHA5Q9HAU0 1116 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 IGSF9Q9P2J2 1179 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 TUBGCP4Q9UGJ1 667 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 CDY1Q9Y6F8 540 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 TSC2P49815 1807 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 A0A087X0B3 334 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 A0A0B4J269 797 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 MYMKA6NI61 221 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 SYN3O14994 580 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 STX6O43752 255 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 PPP1R37O75864 691 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 ABLIM3O94929 683 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 POU2F2P09086 479 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 CLTAP09496 248 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 HNRNPA1P09651 372 aaKnown RBP eCLIP13.48□□□□□ -0.25
MSH5-209ENST00000450148 SCP2P22307 547 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 LRPAP1P30533 357 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 GBP2P32456 591 aaPredicted RBP13.48□□□□□ -0.25
MSH5-209ENST00000450148 NTHL1P78549 312 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 ROR1Q01973 937 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 CEBPZQ03701 1054 aaKnown RBP13.48□□□□□ -0.25
MSH5-209ENST00000450148 SPAG1Q07617 926 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 TCF15Q12870 199 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 TDGQ13569 410 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 SLC39A14Q15043 492 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 ENOX2Q16206 610 aaKnown RBP13.48□□□□□ -0.25
MSH5-209ENST00000450148 UVSSAQ2YD98 709 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 ZC2HC1CQ53FD0 456 aaPredicted RBP13.48□□□□□ -0.25
MSH5-209ENST00000450148 PPM1LQ5SGD2 360 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 VARS2Q5ST30 1063 aaKnown RBP13.48□□□□□ -0.25
MSH5-209ENST00000450148 AXDND1Q5T1B0 1012 aaPredicted RBP13.48□□□□□ -0.25
MSH5-209ENST00000450148 MAP4K3Q8IVH8 894 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 SUGP1Q8IWZ8 645 aaKnown RBP13.48□□□□□ -0.25
MSH5-209ENST00000450148 RSAD2Q8WXG1 361 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 SNX21Q969T3 373 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 DNAJC19Q96DA6 116 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 BICD1Q96G01 975 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 STRA6Q9BX79 667 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 PIDD1Q9HB75 910 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 STK17AQ9UEE5 414 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 DUSP12Q9UNI6 340 aa13.48□□□□□ -0.25
MSH5-209ENST00000450148 WDR27A2RRH5 827 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 LACTBL1A8MY62 500 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 TISP43B9A030 160 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 ANKRD63C9JTQ0 380 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 HNRNPDLO14979 420 aaKnown RBP13.47□□□□□ -0.25
MSH5-209ENST00000450148 OGTO15294 1046 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 CCL16O15467 120 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 NARSO43776 548 aaKnown RBP13.47□□□□□ -0.25
MSH5-209ENST00000450148 LAMP2P13473 410 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 NASPP49321 788 aaPredicted RBP13.47□□□□□ -0.25
MSH5-209ENST00000450148 AARSP49588 968 aaKnown RBP eCLIP13.47□□□□□ -0.252e-6■■■■■ 67
MSH5-209ENST00000450148 LIG4P49917 911 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 LIN9Q5TKA1 542 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 GET4Q7L5D6 327 aaPredicted RBP13.47□□□□□ -0.25
MSH5-209ENST00000450148 ZNF720Q7Z2F6 126 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 GRASPQ7Z6J2 395 aaPredicted RBP13.47□□□□□ -0.25
MSH5-209ENST00000450148 RASSF8Q8NHQ8 419 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 ZNF461Q8TAF7 563 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 SLC7A14Q8TBB6 771 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 IKZF4Q9H2S9 585 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 ZSCAN16Q9H4T2 348 aaPredicted RBP13.47□□□□□ -0.25
MSH5-209ENST00000450148 CPSF3Q9UKF6 684 aaKnown RBP13.47□□□□□ -0.25
MSH5-209ENST00000450148 STYXL1Q9Y6J8 313 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 TCHHQ07283 1943 aa13.47□□□□□ -0.25
MSH5-209ENST00000450148 ANHXE9PGG2 379 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 M0QZQ0 153 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 TBCAO75347 108 aaKnown RBP13.46□□□□□ -0.25
MSH5-209ENST00000450148 KRT18P05783 430 aaKnown RBP13.46□□□□□ -0.25
MSH5-209ENST00000450148 NPR3P17342 541 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 CYP3A5P20815 502 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 MATR3P43243 847 aaKnown RBP eCLIP13.46□□□□□ -0.25
MSH5-209ENST00000450148 GUCY2FP51841 1108 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 HTR4Q13639 388 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 CWF19L1Q69YN2 538 aaKnown RBP13.46□□□□□ -0.25
MSH5-209ENST00000450148 POTEHQ6S545 545 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 RTL10Q7L3V2 364 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 DYMQ7RTS9 669 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 SFR1Q86XK3 245 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 SLC44A3Q8N4M1 653 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 TMEM105Q8N8V8 129 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 LINC00301Q8NCQ3 95 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 DDX12PQ92771 950 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 KIF12Q96FN5 646 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 ZHX3Q9H4I2 956 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 HCFC1R1Q9NWW0 138 aa13.46□□□□□ -0.25
MSH5-209ENST00000450148 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.46□□□□□ -0.25
MSH5-209ENST00000450148 DNMT3BQ9UBC3 853 aaKnown RBP13.46□□□□□ -0.25
MSH5-209ENST00000450148 CCDC39Q9UFE4 941 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms