RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 LACTBL1A8MY62 500 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 HLA-DRAP01903 254 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 C4BPAP04003 597 aaKnown RBP13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 UCHL3P15374 230 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 KRT9P35527 623 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 POLR2FP61218 127 aaKnown RBP13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 ZBED6P86452 979 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 CCZ1BP86790 482 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 CCZ1P86791 482 aaPredicted RBP13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 LRMPQ12912 555 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 DSC3Q14574 896 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 SLC10A6Q3KNW5 377 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 KLHDC7AQ5VTJ3 777 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 JADE1Q6IE81 842 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 CD302Q8IX05 232 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 SMG8Q8ND04 991 aaKnown RBP13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 EHBP1Q8NDI1 1231 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 ZNF397Q8NF99 534 aaPredicted RBP13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 LMO3Q8TAP4 145 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 BAP1Q92560 729 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 PANX2Q96RD6 677 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 GAS2L1Q99501 681 aaPredicted RBP13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 APOL6Q9BWW8 343 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 IFIH1Q9BYX4 1025 aaKnown RBP13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 EDEM3Q9BZQ6 932 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 TMX1Q9H3N1 280 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 FAM105AQ9NUU6 356 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 CNTN3Q9P232 1028 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 C2CD2Q9Y426 696 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 HES2Q9Y543 173 aa13.72□□□□□ -0.21
HLA-DRB9-201ENST00000449413 TSC2P49815 1807 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 LRRC53A6NM62 1247 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 RNF225M0QZC1 329 aaPredicted RBP13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 NRDCO43847 1150 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 MGEA5O60502 916 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 ZC3H11AO75152 810 aaKnown RBP eCLIP13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 VNN1O95497 513 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 TNNC2P02585 160 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 ZSCAN20P17040 1043 aaPredicted RBP13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 TFAMQ00059 246 aaKnown RBP13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 TLE2Q04725 743 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 FAAP100Q0VG06 881 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 TMEM132DQ14C87 1099 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 PDXDC1Q6P996 788 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 NT5DC4Q86YG4 428 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 TMEM139Q8IV31 216 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 HACE1Q8IYU2 909 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 SEMA4DQ92854 862 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 TIFAQ96CG3 184 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 TRAIPQ9BWF2 469 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 HIPK3Q9H422 1215 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 PLEKHA5Q9HAU0 1116 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 NLRC4Q9NPP4 1024 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 RAB20Q9NX57 234 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 AJAP1Q9UKB5 411 aaPredicted RBP13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 TBX21Q9UL17 535 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 DERAQ9Y315 318 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 PCDHB2Q9Y5E7 798 aa13.71□□□□□ -0.21
HLA-DRB9-201ENST00000449413 PHACTR2O75167 634 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 CLTBP09497 229 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 FECHP22830 423 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 AKAP5P24588 427 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ITGB8P26012 769 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 EPHB4P54760 987 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 JAM2P57087 298 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 NCOA4Q13772 614 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 DUOXA2Q1HG44 320 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 IQCEQ6IPM2 695 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 GJB7Q6PEY0 223 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 TRAPPC11Q7Z392 1133 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ARHGEF19Q8IW93 802 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 LINC01599Q8WXQ3 324 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 KIF12Q96FN5 646 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ZNF830Q96NB3 372 aaPredicted RBP13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 NT5C1BQ96P26 610 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 NAA15Q9BXJ9 866 aaKnown RBP13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PPP1R12CQ9BZL4 782 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 IMPG2Q9BZV3 1241 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 WNT8AQ9H1J5 351 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 C1orf112Q9NSG2 853 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 MYO6Q9UM54 1294 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 CHD7Q9P2D1 2997 aa13.7□□□□□ -0.22
HLA-DRB9-201ENST00000449413 F8VZ95 297 aa13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 NBNO60934 754 aa13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 LRRN2O75325 713 aa13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 NOP14P78316 857 aaKnown RBP13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 RAPGEF1Q13905 1077 aa13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 E4F1Q66K89 784 aaPredicted RBP13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PHLDB3Q6NSJ2 640 aa13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 RRAGAQ7L523 313 aa13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 OR8K1Q8NGG5 319 aa13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 PPM1EQ8WY54 764 aa13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 SPAG5Q96R06 1193 aa13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 BAG1Q99933 345 aaPredicted RBP13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 ADAM2Q99965 735 aa13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 NUCKS1Q9H1E3 243 aaKnown RBP13.69□□□□□ -0.22
HLA-DRB9-201ENST00000449413 RNF39Q9H2S5 420 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms