RNA–Protein interactions for RNA: ENST00000448789.2

RAB5B-202, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5B, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-202ENST00000448789 CCDC42Q96M95 316 aa16.22■□□□□ 0.19
RAB5B-202ENST00000448789 ZMAT2Q96NC0 199 aaKnown RBP16.22■□□□□ 0.19
RAB5B-202ENST00000448789 TRIM6Q9C030 488 aaPredicted RBP16.22■□□□□ 0.19
RAB5B-202ENST00000448789 C1orf112Q9NSG2 853 aa16.22■□□□□ 0.19
RAB5B-202ENST00000448789 PADI3Q9ULW8 664 aa16.22■□□□□ 0.19
RAB5B-202ENST00000448789 IPPQ9Y573 584 aa16.22■□□□□ 0.19
RAB5B-202ENST00000448789 EIF3CLB5ME19 914 aaKnown RBP16.21■□□□□ 0.19
RAB5B-202ENST00000448789 MGEA5O60502 916 aa16.21■□□□□ 0.19
RAB5B-202ENST00000448789 ABL1P00519 1130 aa16.21■□□□□ 0.19
RAB5B-202ENST00000448789 ASS1P00966 412 aaKnown RBP16.21■□□□□ 0.19
RAB5B-202ENST00000448789 TNNC2P02585 160 aa16.21■□□□□ 0.19
RAB5B-202ENST00000448789 FERP16591 822 aa16.21■□□□□ 0.19
RAB5B-202ENST00000448789 CLCN1P35523 988 aa16.21■□□□□ 0.19
RAB5B-202ENST00000448789 GCNT1Q02742 428 aa16.21■□□□□ 0.19
RAB5B-202ENST00000448789 GFPT1Q06210 699 aaPredicted RBP16.21■□□□□ 0.19
RAB5B-202ENST00000448789 MBTPS1Q14703 1052 aa16.21■□□□□ 0.19
RAB5B-202ENST00000448789 TMEM132DQ14C87 1099 aa16.21■□□□□ 0.19
RAB5B-202ENST00000448789 TWF2Q6IBS0 349 aaKnown RBP16.21■□□□□ 0.19
RAB5B-202ENST00000448789 NYAP1Q6ZVC0 841 aa16.21■□□□□ 0.19
RAB5B-202ENST00000448789 APBB1IPQ7Z5R6 666 aaPredicted RBP16.21■□□□□ 0.19
RAB5B-202ENST00000448789 FAM126BQ8IXS8 530 aa16.21■□□□□ 0.19
RAB5B-202ENST00000448789 EIF3CQ99613 913 aaKnown RBP16.21■□□□□ 0.19
RAB5B-202ENST00000448789 SYT11Q9BT88 431 aa16.21■□□□□ 0.19
RAB5B-202ENST00000448789 XYLT2Q9H1B5 865 aa16.21■□□□□ 0.19
RAB5B-202ENST00000448789 ACP6Q9NPH0 428 aa16.21■□□□□ 0.19
RAB5B-202ENST00000448789 RALGAPA2Q2PPJ7 1873 aa16.21■□□□□ 0.19
RAB5B-202ENST00000448789 A0A087X0T9 212 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 RCCD1A6NED2 376 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 MEIS3P2A8K0S8 358 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 ZSCAN12O43309 604 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 FAM228BP0C875 321 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 ARHGAP25P42331 645 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 MFAP3P55082 362 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 WDR44Q5JSH3 913 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 GLRA4Q5JXX5 417 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 FBXO46Q6PJ61 603 aaPredicted RBP16.2■□□□□ 0.18
RAB5B-202ENST00000448789 ALKAL1Q6UXT8 129 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 FAM71AQ8IYT1 594 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 KIF12Q96FN5 646 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 DEF6Q9H4E7 631 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 KLK14Q9P0G3 267 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 TRIM10Q9UDY6 481 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 C2CD2Q9Y426 696 aa16.2■□□□□ 0.18
RAB5B-202ENST00000448789 AKR1B10O60218 316 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 LCA5LO95447 670 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 CALCAP01258 141 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 ITGB3P05106 788 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 ACO1P21399 889 aaKnown RBP16.19■□□□□ 0.18
RAB5B-202ENST00000448789 USP8P40818 1118 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 PAK2Q13177 524 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 CUL2Q13617 745 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 DSC3Q14574 896 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 U2AF1L4Q8WU68 220 aaKnown RBP16.19■□□□□ 0.18
RAB5B-202ENST00000448789 SLC20A1Q8WUM9 679 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 C18orf25Q96B23 403 aaPredicted RBP16.19■□□□□ 0.18
RAB5B-202ENST00000448789 CRISPLD2Q9H0B8 497 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 PLEKHA5Q9HAU0 1116 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 CNTN3Q9P232 1028 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 TUBGCP4Q9UGJ1 667 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 PCDHB2Q9Y5E7 798 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 GPR182O15218 404 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 CYP26A1O43174 497 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 CAND2O75155 1236 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 CLSTN1O94985 981 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 SGPL1O95470 568 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 CD4P01730 458 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 KRT19P08727 400 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 HSPA1AP0DMV8 641 aaKnown RBP16.19■□□□□ 0.18
RAB5B-202ENST00000448789 HSPA1BP0DMV9 641 aaKnown RBP16.19■□□□□ 0.18
RAB5B-202ENST00000448789 POLR2BP30876 1174 aaKnown RBP16.19■□□□□ 0.18
RAB5B-202ENST00000448789 ATN1P54259 1190 aaPredicted RBP16.19■□□□□ 0.18
RAB5B-202ENST00000448789 YARSP54577 528 aaKnown RBP16.19■□□□□ 0.18
RAB5B-202ENST00000448789 TRPC3Q13507 836 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 ZBTB6Q15916 424 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 ZNF699Q32M78 642 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 LNX1Q8TBB1 728 aaPredicted RBP16.19■□□□□ 0.18
RAB5B-202ENST00000448789 DIS3LQ8TF46 1054 aaKnown RBP16.19■□□□□ 0.18
RAB5B-202ENST00000448789 LZTFL1Q9NQ48 299 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 FAM105AQ9NUU6 356 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 PARP2Q9UGN5 583 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 ADAMTS1Q9UHI8 967 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 NENFQ9UMX5 172 aa16.19■□□□□ 0.18
RAB5B-202ENST00000448789 DDX3XO00571 662 aaKnown RBP eCLIP16.18■□□□□ 0.189e-12■■■■□ 20.3
RAB5B-202ENST00000448789 PPEF2O14830 753 aa16.18■□□□□ 0.18
RAB5B-202ENST00000448789 CCP110O43303 1012 aa16.18■□□□□ 0.18
RAB5B-202ENST00000448789 SCARA5Q6ZMJ2 495 aa16.18■□□□□ 0.18
RAB5B-202ENST00000448789 ENOSF1Q7L5Y1 443 aa16.18■□□□□ 0.18
RAB5B-202ENST00000448789 DNAAF5Q86Y56 855 aa16.18■□□□□ 0.18
RAB5B-202ENST00000448789 PALB2Q86YC2 1186 aa16.18■□□□□ 0.18
RAB5B-202ENST00000448789 CD302Q8IX05 232 aa16.18■□□□□ 0.18
RAB5B-202ENST00000448789 UBR7Q8N806 425 aa16.18■□□□□ 0.18
RAB5B-202ENST00000448789 ARMC5Q96C12 935 aa16.18■□□□□ 0.18
RAB5B-202ENST00000448789 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.18■□□□□ 0.18
RAB5B-202ENST00000448789 IRX2Q9BZI1 471 aaPredicted RBP16.18■□□□□ 0.18
RAB5B-202ENST00000448789 IMPG2Q9BZV3 1241 aa16.18■□□□□ 0.18
RAB5B-202ENST00000448789 NIF3L1Q9GZT8 377 aa16.18■□□□□ 0.18
RAB5B-202ENST00000448789 LACRTQ9GZZ8 138 aa16.18■□□□□ 0.18
RAB5B-202ENST00000448789 CHST12Q9NRB3 414 aa16.18■□□□□ 0.18
RAB5B-202ENST00000448789 DPP3Q9NY33 737 aa16.18■□□□□ 0.18
RAB5B-202ENST00000448789 POLIQ9UNA4 740 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms