RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ADCY2Q08462 1091 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 XRRA1Q6P2D8 792 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 MCOLN2Q8IZK6 566 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 UBL4BQ8N7F7 174 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 FGD4Q96M96 766 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 FMO2Q99518 471 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 MINDY3Q9H8M7 445 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 ATP2A1O14983 1001 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 KIAA0391O15091 583 aaKnown RBP15.82■□□□□ 0.12
SF1-211ENST00000448404 CNMDO75829 334 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 CYP1A2P05177 515 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 UNGP13051 313 aaPredicted RBP15.82■□□□□ 0.12
SF1-211ENST00000448404 ACO1P21399 889 aaKnown RBP15.82■□□□□ 0.12
SF1-211ENST00000448404 GARTP22102 1010 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 RAP1GAPP47736 663 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 NOP14P78316 857 aaKnown RBP15.82■□□□□ 0.12
SF1-211ENST00000448404 WDR44Q5JSH3 913 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 DUPD1Q68J44 220 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 CDHR1Q96JP9 859 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 SLITRK6Q9H5Y7 841 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 ZNF408Q9H9D4 720 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 ZDHHC18Q9NUE0 388 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 GTF3C4Q9UKN8 822 aa15.82■□□□□ 0.12
SF1-211ENST00000448404 SOCS7O14512 581 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 THAP12O43422 761 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 BRD2P25440 801 aaKnown RBP15.81■□□□□ 0.12
SF1-211ENST00000448404 TFAMQ00059 246 aaKnown RBP15.81■□□□□ 0.12
SF1-211ENST00000448404 CUL1Q13616 776 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 SIX1Q15475 284 aaPredicted RBP15.81■□□□□ 0.12
SF1-211ENST00000448404 KRT71Q3SY84 523 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 EEF1DP3Q658K8 133 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 C11orf63Q6NUN7 778 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 SLC13A5Q86YT5 568 aaPredicted RBP15.81■□□□□ 0.12
SF1-211ENST00000448404 ATP6V1G3Q96LB4 118 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 EPB41L4BQ9H329 900 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 PPANQ9NQ55 473 aaKnown RBP15.81■□□□□ 0.12
SF1-211ENST00000448404 GINM1Q9NU53 330 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 GRHL1Q9NZI5 618 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 CNTNAP2Q9UHC6 1331 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 MAPK13O15264 365 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 IQCF3P0C7M6 154 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 GZMAP12544 262 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 CUL2Q13617 745 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 PSMD6Q15008 389 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 SEL1L2Q5TEA6 688 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 CCDC50Q8IVM0 306 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 RNF25Q96BH1 459 aaPredicted RBP15.81■□□□□ 0.12
SF1-211ENST00000448404 DCPSQ96C86 337 aaKnown RBP15.81■□□□□ 0.12
SF1-211ENST00000448404 FHDC1Q9C0D6 1143 aaPredicted RBP15.81■□□□□ 0.12
SF1-211ENST00000448404 RBPJLQ9UBG7 517 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 PAPPA2Q9BXP8 1791 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 A0A0B4J269 797 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 GOLGA6L10A0A0M3HER8 536 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 ATG7O95352 703 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 GNA15P30679 374 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 NCOA4Q13772 614 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 TTC31Q49AM3 519 aaPredicted RBP15.81■□□□□ 0.12
SF1-211ENST00000448404 CCDC38Q502W7 563 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 ZFYVE27Q5T4F4 411 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 TXNRD3NBQ6F5E7 133 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 MREGQ8N565 214 aa15.81■□□□□ 0.12
SF1-211ENST00000448404 RBBP8NLQ8NC74 664 aaPredicted RBP15.81■□□□□ 0.12
SF1-211ENST00000448404 NXF1Q9UBU9 619 aaKnown RBP15.81■□□□□ 0.12
SF1-211ENST00000448404 LOXHD1Q8IVV2 1947 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 LTBP3Q9NS15 1303 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 ZBTB42B2RXF5 422 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 BHMG1C9JSJ3 638 aaPredicted RBP15.8■□□□□ 0.12
SF1-211ENST00000448404 INO80B-WBP1J3KQ70 363 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 EIF3HO15372 352 aaKnown RBP eCLIP15.8■□□□□ 0.126e-9■□□□□ 8.2
SF1-211ENST00000448404 CAND2O75155 1236 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 KRT10P13645 584 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 NSFP46459 744 aaKnown RBP15.8■□□□□ 0.12
SF1-211ENST00000448404 MAGOHP61326 146 aaKnown RBP15.8■□□□□ 0.12
SF1-211ENST00000448404 MTM1Q13496 603 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 TMEM132AQ24JP5 1023 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 ODF2Q5BJF6 829 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 CYP4A22Q5TCH4 519 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 KAZNQ674X7 775 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 TAB3Q8N5C8 712 aaPredicted RBP15.8■□□□□ 0.12
SF1-211ENST00000448404 RUBCNQ92622 972 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 HAUS1Q96CS2 278 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 INO80BQ9C086 356 aaPredicted RBP15.8■□□□□ 0.12
SF1-211ENST00000448404 C17orf75Q9HAS0 396 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 TMBIM4Q9HC24 238 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 PIK3R2O00459 728 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 NOP56O00567 594 aaKnown RBP15.8■□□□□ 0.12
SF1-211ENST00000448404 PHF2O75151 1096 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 MYZAPP0CAP1 466 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 NAMPTP43490 491 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 CDH8P55286 799 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 LAMTOR4Q0VGL1 99 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 SLC29A2Q14542 456 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 HP1BP3Q5SSJ5 553 aaPredicted RBP15.8■□□□□ 0.12
SF1-211ENST00000448404 DPH6Q7L8W6 267 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 RIOX2Q8IUF8 465 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 SPATA33Q96N06 139 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 DDX23Q9BUQ8 820 aaKnown RBP15.8■□□□□ 0.12
SF1-211ENST00000448404 RNPEPQ9H4A4 650 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 C10orf88Q9H8K7 445 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 POLIQ9UNA4 740 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms