RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 RALGAPBQ86X10 1494 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 ENC1O14682 589 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 H2AFYO75367 372 aaKnown RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 FGGP02679 453 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 CXCR5P32302 372 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 TECP42680 631 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 PEX5P50542 639 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 LMBR1LQ6UX01 489 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 BLIDQ8IZY5 108 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 CABLES1Q8TDN4 633 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 EFCAB1Q9HAE3 211 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 KLHL28Q9NXS3 571 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 TMEM5Q9Y2B1 443 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 RP1P56715 2156 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 INO80B-WBP1J3KQ70 363 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 KLHL41O60662 606 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 GSTM1P09488 218 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 SLC29A2Q14542 456 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 PKN1Q16512 942 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 SHQ1Q6PI26 577 aaKnown RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 SYDE1Q6ZW31 735 aaPredicted RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 ARHGAP22Q7Z5H3 698 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 FSTL5Q8N475 847 aaPredicted RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 KATNAL1Q9BW62 490 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 INO80BQ9C086 356 aaPredicted RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 NGRNQ9NPE2 291 aaKnown RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 RPS6KB2Q9UBS0 482 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 RSL24D1Q9UHA3 163 aaKnown RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 BAIAP2Q9UQB8 552 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 FHOD1Q9Y613 1164 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 HSMCR30P0CW71 290 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 PABPC1P11940 636 aaKnown RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 IFNGR2P38484 337 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 PLA2G4AP47712 749 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 CAV3P56539 151 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 BST2Q10589 180 aaKnown RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 HIST2H2ACQ16777 129 aaPredicted RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 C12orf60Q5U649 245 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 HIST2H2AA3Q6FI13 130 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 MZT2AQ6P582 158 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 SIX5Q8N196 739 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 SHCBP1Q8NEM2 672 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 BEST2Q8NFU1 509 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 C1QTNF1Q9BXJ1 281 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 RPF1Q9H9Y2 349 aaKnown RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 AATKQ6ZMQ8 1374 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 ARHGEF33A8MVX0 844 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 SSNA1O43805 119 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 LDOC1O95751 146 aaPredicted RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 LDHAP00338 332 aaKnown RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 CNPP09543 421 aaKnown RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 NOS3P29474 1203 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 PPP2R1BP30154 601 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 ZBED6P86452 979 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 EXOC3L1Q86VI1 746 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 COMMD2Q86X83 199 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 HEXIM2Q96MH2 286 aaKnown RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 UNC45AQ9H3U1 944 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 TMEM138Q9NPI0 162 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 MLXQ9UH92 298 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 SIK3Q9Y2K2 1263 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 ABCC12Q96J65 1359 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 CCDC195A0A1B0GUA6 201 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 GRID2IPA4D2P6 1211 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 EFCAB10A6NFE3 127 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 PCP4L1A6NKN8 68 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 MDM4O15151 490 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 ULK1O75385 1050 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 SERPIND1P05546 499 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 ZNF806P0C7X5 589 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 ALDH3A2P51648 485 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 CLCN6P51797 869 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 HSF2Q03933 536 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 DLG1Q12959 904 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 OCLNQ16625 522 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 SPATA21Q7Z572 469 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 FANCLQ9NW38 375 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 SPEF1Q9Y4P9 236 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 SPAG17Q6Q759 2223 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 FAM220BPB1ANY3 271 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 DPYSL4O14531 572 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 TM9SF1O15321 606 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 DDHD2O94830 711 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 UFL1O94874 794 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 ARMC6Q6NXE6 501 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 MIS18BP1Q6P0N0 1132 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 NUDT16Q96DE0 195 aaKnown RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 SEC16BQ96JE7 1060 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 WDR11Q9BZH6 1224 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 PNPLA8Q9NP80 782 aa9.35□□□□□ -0.91
NIPBL-202ENST00000448238 STOX2Q9P2F5 926 aaPredicted RBP9.35□□□□□ -0.91
NIPBL-202ENST00000448238 HEATR1Q9H583 2144 aaKnown RBP9.34□□□□□ -0.91
NIPBL-202ENST00000448238 ALDH18A1P54886 795 aaKnown RBP9.34□□□□□ -0.91
NIPBL-202ENST00000448238 ZNF284Q2VY69 593 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 VN1R5Q7Z5H4 357 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 RDM1Q8NG50 284 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 CYFIP2Q96F07 1278 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 SPASTQ9UBP0 616 aa9.34□□□□□ -0.91
NIPBL-202ENST00000448238 AFF4Q9UHB7 1163 aaKnown RBP9.34□□□□□ -0.91
NIPBL-202ENST00000448238 SEPT9Q9UHD8 586 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms