RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 RARGP13631 454 aa12.24□□□□□ -0.45
GNE-203ENST00000447283 ADORA2AP29274 412 aa12.24□□□□□ -0.45
GNE-203ENST00000447283 MARCKSL1P49006 195 aa12.24□□□□□ -0.45
GNE-203ENST00000447283 IFI35P80217 286 aaPredicted RBP12.24□□□□□ -0.45
GNE-203ENST00000447283 PWP2Q15269 919 aaKnown RBP12.24□□□□□ -0.45
GNE-203ENST00000447283 SEL1L2Q5TEA6 688 aa12.24□□□□□ -0.45
GNE-203ENST00000447283 MFSD5Q6N075 450 aa12.24□□□□□ -0.45
GNE-203ENST00000447283 CCDC137Q6PK04 289 aaKnown RBP12.24□□□□□ -0.45
GNE-203ENST00000447283 C17orf99Q6UX52 265 aa12.24□□□□□ -0.45
GNE-203ENST00000447283 B3GNT9Q6UX72 402 aa12.24□□□□□ -0.45
GNE-203ENST00000447283 INTS8Q75QN2 995 aaKnown RBP12.24□□□□□ -0.45
GNE-203ENST00000447283 CYFIP1Q7L576 1253 aa12.24□□□□□ -0.45
GNE-203ENST00000447283 GPR142Q7Z601 462 aa12.24□□□□□ -0.45
GNE-203ENST00000447283 FAM228AQ86W67 206 aa12.24□□□□□ -0.45
GNE-203ENST00000447283 ART4Q93070 314 aa12.24□□□□□ -0.45
GNE-203ENST00000447283 UBE2TQ9NPD8 197 aaPredicted RBP12.24□□□□□ -0.45
GNE-203ENST00000447283 WRAP73Q9P2S5 460 aaPredicted RBP12.24□□□□□ -0.45
GNE-203ENST00000447283 MCM8Q9UJA3 840 aa12.24□□□□□ -0.45
GNE-203ENST00000447283 TPX2Q9ULW0 747 aaKnown RBP12.24□□□□□ -0.45
GNE-203ENST00000447283 ADGRA2Q96PE1 1338 aa12.24□□□□□ -0.45
GNE-203ENST00000447283 SPATA31C2B4DYI2 1134 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 COMTP21964 271 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 CETN1Q12798 172 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 NEDD9Q14511 834 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 EPC2Q52LR7 807 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 PLEKHH3Q7Z736 793 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 ARHGEF19Q8IW93 802 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 LRRC34Q8IZ02 419 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 RPUSD2Q8IZ73 545 aaKnown RBP12.23□□□□□ -0.45
GNE-203ENST00000447283 C12orf50Q8NA57 414 aaPredicted RBP12.23□□□□□ -0.45
GNE-203ENST00000447283 UNC45AQ9H3U1 944 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 CXorf56Q9H5V9 222 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 USP20Q9Y2K6 914 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 EMSYQ7Z589 1322 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 DDX39AO00148 427 aaKnown RBP12.23□□□□□ -0.45
GNE-203ENST00000447283 ALDH1A1P00352 501 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 GZMAP12544 262 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 ICAM3P32942 547 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 COILP38432 576 aaPredicted RBP12.23□□□□□ -0.45
GNE-203ENST00000447283 AUHQ13825 339 aaKnown RBP12.23□□□□□ -0.45
GNE-203ENST00000447283 ZNF568Q3ZCX4 644 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 C12orf56Q8IXR9 622 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 REM2Q8IYK8 340 aaPredicted RBP12.23□□□□□ -0.45
GNE-203ENST00000447283 SYCP3Q8IZU3 236 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 DAW1Q8N136 415 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 BANK1Q8NDB2 785 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 CAPNS2Q96L46 248 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 FGD4Q96M96 766 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 ROPN1BQ9BZX4 212 aaPredicted RBP12.23□□□□□ -0.45
GNE-203ENST00000447283 ROPN1Q9HAT0 212 aaPredicted RBP12.23□□□□□ -0.45
GNE-203ENST00000447283 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.23□□□□□ -0.45
GNE-203ENST00000447283 SAMD15Q9P1V8 674 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 TCEAL9Q9UHQ7 104 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 MTUS1Q9ULD2 1270 aa12.23□□□□□ -0.45
GNE-203ENST00000447283 ASB14A6NK59 587 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 RASGRF2O14827 1237 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 PMM2O15305 246 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 CA12O43570 354 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 HIP1RO75146 1068 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 MAPTP10636 758 aaKnown RBP12.22□□□□□ -0.45
GNE-203ENST00000447283 PYGMP11217 842 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 SLC8A1P32418 973 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 VAMP7P51809 220 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 DLG4P78352 724 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 CRHR2Q13324 411 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 ALCAMQ13740 583 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 MESDQ14696 234 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 SIX1Q15475 284 aaPredicted RBP12.22□□□□□ -0.45
GNE-203ENST00000447283 ZNF792Q3KQV3 632 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 UBAP2Q5T6F2 1119 aaKnown RBP12.22□□□□□ -0.45
GNE-203ENST00000447283 SEPT14Q6ZU15 432 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 TAOK1Q7L7X3 1001 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 MIER3Q7Z3K6 550 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 DPP9Q86TI2 863 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 SLC13A5Q86YT5 568 aaPredicted RBP12.22□□□□□ -0.45
GNE-203ENST00000447283 GPATCH11Q8N954 259 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 EPS8L3Q8TE67 593 aaKnown RBP12.22□□□□□ -0.45
GNE-203ENST00000447283 NSRP1Q9H0G5 558 aaKnown RBP12.22□□□□□ -0.45
GNE-203ENST00000447283 NOCTQ9UK39 431 aaKnown RBP12.22□□□□□ -0.45
GNE-203ENST00000447283 ARHGEF35A5YM69 484 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 SMIM23A6NLE4 172 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 TMEM110-MUSTN1A8MSY1 372 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 ATP2C2O75185 946 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 TGFB3P10600 412 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 KCNA2P16389 499 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 CHRNB2P17787 502 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 FGFR4P22455 802 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 ELF3P78545 371 aaPredicted RBP12.22□□□□□ -0.45
GNE-203ENST00000447283 KRT76Q01546 638 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 PPP3CAQ08209 521 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 GRB14Q14449 540 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 CNGA2Q16280 664 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 TRMT10CQ7L0Y3 403 aaKnown RBP12.22□□□□□ -0.45
GNE-203ENST00000447283 RDH13Q8NBN7 331 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 EPS8L1Q8TE68 723 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 SLCO2A1Q92959 643 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 PCDHB18PQ96TA0 734 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 PRMT1Q99873 361 aaKnown RBP12.22□□□□□ -0.45
GNE-203ENST00000447283 TMEM206Q9H813 350 aa12.22□□□□□ -0.45
GNE-203ENST00000447283 ZNFX1Q9P2E3 1918 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms