RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 CST3P01034 146 aaPredicted RBP18.79■□□□□ 0.6
SGCE-206ENST00000445866 KRT19P08727 400 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 SOX4Q06945 474 aaPredicted RBP18.79■□□□□ 0.6
SGCE-206ENST00000445866 TRPC3Q13507 836 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 ZACNQ401N2 412 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 TDRD10Q5VZ19 366 aaKnown RBP18.79■□□□□ 0.6
SGCE-206ENST00000445866 C1orf127Q8N9H9 656 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 ZNF689Q96CS4 500 aaPredicted RBP18.79■□□□□ 0.6
SGCE-206ENST00000445866 RAD9AQ99638 391 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 MRPL9Q9BYD2 267 aaKnown RBP18.79■□□□□ 0.6
SGCE-206ENST00000445866 AGAP1Q9UPQ3 857 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 INSL6Q9Y581 213 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 LGALS16A8MUM7 142 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 DDHD2O94830 711 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 RBP5P82980 135 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 MYL7Q01449 175 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 BTG3Q14201 252 aaPredicted RBP18.79■□□□□ 0.6
SGCE-206ENST00000445866 NR1I3Q14994 352 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 NAB2Q15742 525 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 C15orf39Q6ZRI6 1047 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 TAS1R2Q8TE23 839 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 CRACR2AQ9BSW2 395 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 TRIM5Q9C035 493 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 GOLGA2P5Q9HBQ8 144 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 ITGA11Q9UKX5 1188 aa18.79■□□□□ 0.6
SGCE-206ENST00000445866 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.79■□□□□ 0.6
SGCE-206ENST00000445866 A0A1B0GTH6 734 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 FSD2A1L4K1 749 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 CASTOR2A6NHX0 329 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 PMM2O15305 246 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 P4HA2O15460 535 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 TEX33O43247 280 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 TLL1O43897 1013 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 ALDH2P05091 517 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 ITGB3P05106 788 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 RPL9P32969 192 aaKnown RBP18.78■□□□□ 0.6
SGCE-206ENST00000445866 TUSC3Q13454 348 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 NCOA4Q13772 614 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 SCARA3Q6AZY7 606 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 GBP6Q6ZN66 633 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 FBXL13Q8NEE6 735 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 RABGGTAQ92696 567 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 DDX27Q96GQ7 796 aaKnown RBP18.78■□□□□ 0.6
SGCE-206ENST00000445866 GRPEL1Q9HAV7 217 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 RAB20Q9NX57 234 aa18.78■□□□□ 0.6
SGCE-206ENST00000445866 AP5Z1O43299 807 aa18.77■□□□□ 0.6
SGCE-206ENST00000445866 CBFA2T2O43439 604 aa18.77■□□□□ 0.6
SGCE-206ENST00000445866 VNN1O95497 513 aa18.77■□□□□ 0.6
SGCE-206ENST00000445866 HLA-DRAP01903 254 aa18.77■□□□□ 0.6
SGCE-206ENST00000445866 TPM3P06753 285 aa18.77■□□□□ 0.6
SGCE-206ENST00000445866 POLR2BP30876 1174 aaKnown RBP18.77■□□□□ 0.6
SGCE-206ENST00000445866 BMP8BP34820 402 aa18.77■□□□□ 0.6
SGCE-206ENST00000445866 EXOC3L4Q17RC7 722 aa18.77■□□□□ 0.6
SGCE-206ENST00000445866 SPOUT1Q5T280 376 aaKnown RBP18.77■□□□□ 0.6
SGCE-206ENST00000445866 C9orf57Q5W0N0 161 aa18.77■□□□□ 0.6
SGCE-206ENST00000445866 LRRC43Q8N309 656 aa18.77■□□□□ 0.6
SGCE-206ENST00000445866 EHBP1Q8NDI1 1231 aa18.77■□□□□ 0.6
SGCE-206ENST00000445866 XPO4Q9C0E2 1151 aaKnown RBP18.77■□□□□ 0.6
SGCE-206ENST00000445866 NRDE2Q9H7Z3 1164 aa18.77■□□□□ 0.6
SGCE-206ENST00000445866 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.77■□□□□ 0.6
SGCE-206ENST00000445866 SIX4Q9UIU6 781 aa18.77■□□□□ 0.6
SGCE-206ENST00000445866 PIK3CAP42336 1068 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 OR1G1P47890 313 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 HTRA4P83105 476 aaPredicted RBP18.76■□□□□ 0.59
SGCE-206ENST00000445866 DSC1Q08554 894 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 SARM1Q6SZW1 724 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 CMTR2Q8IYT2 770 aaKnown RBP18.76■□□□□ 0.59
SGCE-206ENST00000445866 SEMA4DQ92854 862 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 CACNG4Q9UBN1 327 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 DNAJB4Q9UDY4 337 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 COQ4Q9Y3A0 265 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 TET1Q8NFU7 2136 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 ANO9A1A5B4 782 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 GRXCR1A8MXD5 290 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 ZC3H11AO75152 810 aaKnown RBP eCLIP18.76■□□□□ 0.59
SGCE-206ENST00000445866 CLSTN1O94985 981 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 LRPAP1P30533 357 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 CLCNKBP51801 687 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 RABGGTBP53611 331 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 MYL6P60660 151 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 SGSM1Q2NKQ1 1148 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 DCLRE1AQ6PJP8 1040 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 COLGALT2Q8IYK4 626 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 CXorf38Q8TB03 319 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 PCMTD1Q96MG8 357 aaPredicted RBP18.76■□□□□ 0.59
SGCE-206ENST00000445866 UROC1Q96N76 676 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 PAAF1Q9BRP4 392 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 HCSTQ9UBK5 93 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 FAN1Q9Y2M0 1017 aa18.76■□□□□ 0.59
SGCE-206ENST00000445866 PODXLO00592 558 aa18.75■□□□□ 0.59
SGCE-206ENST00000445866 PIRO00625 290 aa18.75■□□□□ 0.59
SGCE-206ENST00000445866 B4GALT3O60512 393 aa18.75■□□□□ 0.59
SGCE-206ENST00000445866 LRRN2O75325 713 aa18.75■□□□□ 0.59
SGCE-206ENST00000445866 ALDH7A1P49419 539 aaKnown RBP18.75■□□□□ 0.59
SGCE-206ENST00000445866 UPP1Q16831 310 aa18.75■□□□□ 0.59
SGCE-206ENST00000445866 WDR44Q5JSH3 913 aa18.75■□□□□ 0.59
SGCE-206ENST00000445866 FAM109BQ6ICB4 259 aaPredicted RBP18.75■□□□□ 0.59
SGCE-206ENST00000445866 FIBCD1Q8N539 461 aa18.75■□□□□ 0.59
SGCE-206ENST00000445866 CCDC150Q8NCX0 1101 aa18.75■□□□□ 0.59
SGCE-206ENST00000445866 HPDLQ96IR7 371 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms