RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 SNW1Q13573 536 aaKnown RBP26.03■■□□□ 1.76
C9orf3-207ENST00000445181 KIAA1841Q6NSI8 718 aa26.03■■□□□ 1.76
C9orf3-207ENST00000445181 ANKRD54Q6NXT1 300 aa26.03■■□□□ 1.76
C9orf3-207ENST00000445181 FUT10Q6P4F1 479 aa26.03■■□□□ 1.76
C9orf3-207ENST00000445181 CD302Q8IX05 232 aa26.03■■□□□ 1.76
C9orf3-207ENST00000445181 ENGASEQ8NFI3 743 aa26.03■■□□□ 1.76
C9orf3-207ENST00000445181 DDX27Q96GQ7 796 aaKnown RBP26.03■■□□□ 1.76
C9orf3-207ENST00000445181 CBWD1Q9BRT8 395 aa26.03■■□□□ 1.76
C9orf3-207ENST00000445181 HERC2P3Q9BVR0 1158 aa26.03■■□□□ 1.76
C9orf3-207ENST00000445181 PCIF1Q9H4Z3 704 aa26.03■■□□□ 1.76
C9orf3-207ENST00000445181 MRPL17Q9NRX2 175 aaKnown RBP26.03■■□□□ 1.76
C9orf3-207ENST00000445181 SF3B1O75533 1304 aaKnown RBP eCLIP26.03■■□□□ 1.763e-6■■■■■ 137.9
C9orf3-207ENST00000445181 C2CD2LO14523 706 aa26.02■■□□□ 1.76
C9orf3-207ENST00000445181 CLASP2O75122 1294 aaKnown RBP26.02■■□□□ 1.76
C9orf3-207ENST00000445181 GADD45BO75293 160 aaPredicted RBP26.02■■□□□ 1.76
C9orf3-207ENST00000445181 B3GAT3O94766 335 aa26.02■■□□□ 1.76
C9orf3-207ENST00000445181 LDHAP00338 332 aaKnown RBP26.02■■□□□ 1.76
C9orf3-207ENST00000445181 ALADP13716 330 aa26.02■■□□□ 1.76
C9orf3-207ENST00000445181 HOXD13P35453 343 aa26.02■■□□□ 1.76
C9orf3-207ENST00000445181 STK4Q13043 487 aa26.02■■□□□ 1.76
C9orf3-207ENST00000445181 UPP1Q16831 310 aa26.02■■□□□ 1.76
C9orf3-207ENST00000445181 TMEM31Q5JXX7 168 aa26.02■■□□□ 1.76
C9orf3-207ENST00000445181 DCLRE1AQ6PJP8 1040 aa26.02■■□□□ 1.76
C9orf3-207ENST00000445181 TAS1R1Q7RTX1 841 aa26.02■■□□□ 1.76
C9orf3-207ENST00000445181 HOOK1Q9UJC3 728 aaKnown RBP26.02■■□□□ 1.76
C9orf3-207ENST00000445181 PODXLO00592 558 aa26.01■■□□□ 1.75
C9orf3-207ENST00000445181 XPOTO43592 962 aaKnown RBP26.01■■□□□ 1.75
C9orf3-207ENST00000445181 GLUD2P49448 558 aa26.01■■□□□ 1.75
C9orf3-207ENST00000445181 SYCE2Q6PIF2 218 aa26.01■■□□□ 1.75
C9orf3-207ENST00000445181 HS2ST1Q7LGA3 356 aa26.01■■□□□ 1.75
C9orf3-207ENST00000445181 LRFN3Q9BTN0 628 aa26.01■■□□□ 1.75
C9orf3-207ENST00000445181 APOL5Q9BWW9 433 aa26.01■■□□□ 1.75
C9orf3-207ENST00000445181 GPR62Q9BZJ7 368 aa26.01■■□□□ 1.75
C9orf3-207ENST00000445181 S1PR5Q9H228 398 aa26.01■■□□□ 1.75
C9orf3-207ENST00000445181 TUBGCP4Q9UGJ1 667 aa26.01■■□□□ 1.75
C9orf3-207ENST00000445181 UBQLN1Q9UMX0 589 aaKnown RBP26.01■■□□□ 1.75
C9orf3-207ENST00000445181 SSX2IPQ9Y2D8 614 aa26.01■■□□□ 1.75
C9orf3-207ENST00000445181 HCFC2Q9Y5Z7 792 aa26.01■■□□□ 1.75
C9orf3-207ENST00000445181 GOLGA8IPA6NC78 632 aa26■■□□□ 1.75
C9orf3-207ENST00000445181 GOLGA8JA6NMD2 632 aa26■■□□□ 1.75
C9orf3-207ENST00000445181 KINO60870 393 aaKnown RBP26■■□□□ 1.75
C9orf3-207ENST00000445181 HOXB8P17481 243 aaPredicted RBP26■■□□□ 1.75
C9orf3-207ENST00000445181 RPL9P32969 192 aaKnown RBP26■■□□□ 1.75
C9orf3-207ENST00000445181 PNOCQ13519 176 aa26■■□□□ 1.75
C9orf3-207ENST00000445181 PTPN14Q15678 1187 aa26■■□□□ 1.75
C9orf3-207ENST00000445181 BMT2Q1RMZ1 405 aa26■■□□□ 1.75
C9orf3-207ENST00000445181 USP41Q3LFD5 358 aa26■■□□□ 1.75
C9orf3-207ENST00000445181 JADE1Q6IE81 842 aa26■■□□□ 1.75
C9orf3-207ENST00000445181 KIAA0895Q8NCT3 520 aa26■■□□□ 1.75
C9orf3-207ENST00000445181 CASP10Q92851 521 aa26■■□□□ 1.75
C9orf3-207ENST00000445181 TSPAN18Q96SJ8 248 aa26■■□□□ 1.75
C9orf3-207ENST00000445181 EMILIN2Q9BXX0 1053 aa26■■□□□ 1.75
C9orf3-207ENST00000445181 C11orf16Q9NQ32 467 aa26■■□□□ 1.75
C9orf3-207ENST00000445181 GTF3C5Q9Y5Q8 519 aaPredicted RBP26■■□□□ 1.75
C9orf3-207ENST00000445181 IRAK3Q9Y616 596 aa26■■□□□ 1.75
C9orf3-207ENST00000445181 FAM86C2PA6NEL3 165 aa25.99■■□□□ 1.75
C9orf3-207ENST00000445181 KIAA0391O15091 583 aaKnown RBP25.99■■□□□ 1.75
C9orf3-207ENST00000445181 DCXO43602 365 aa25.99■■□□□ 1.75
C9orf3-207ENST00000445181 EXTL3O43909 919 aa25.99■■□□□ 1.75
C9orf3-207ENST00000445181 GPR37L1O60883 481 aa25.99■■□□□ 1.75
C9orf3-207ENST00000445181 ELAVL2Q12926 359 aaKnown RBP25.99■■□□□ 1.75
C9orf3-207ENST00000445181 TMEM132DQ14C87 1099 aa25.99■■□□□ 1.75
C9orf3-207ENST00000445181 KNOP1Q1ED39 458 aaKnown RBP25.99■■□□□ 1.75
C9orf3-207ENST00000445181 CRELD2Q6UXH1 353 aaPredicted RBP25.99■■□□□ 1.75
C9orf3-207ENST00000445181 GPD1LQ8N335 351 aa25.99■■□□□ 1.75
C9orf3-207ENST00000445181 ZSWIM2Q8NEG5 633 aa25.99■■□□□ 1.75
C9orf3-207ENST00000445181 SUSD6Q92537 303 aa25.99■■□□□ 1.75
C9orf3-207ENST00000445181 B3GALT6Q96L58 329 aa25.99■■□□□ 1.75
C9orf3-207ENST00000445181 TIGD1Q96MW7 591 aa25.99■■□□□ 1.75
C9orf3-207ENST00000445181 ASB7Q9H672 318 aa25.99■■□□□ 1.75
C9orf3-207ENST00000445181 AGPAT3Q9NRZ7 376 aa25.99■■□□□ 1.75
C9orf3-207ENST00000445181 RBAKQ9NYW8 714 aaPredicted RBP25.99■■□□□ 1.75
C9orf3-207ENST00000445181 PDCD11Q14690 1871 aaKnown RBP25.98■■□□□ 1.75
C9orf3-207ENST00000445181 TMEM189-UBE2V1I3L0A0 370 aa25.98■■□□□ 1.75
C9orf3-207ENST00000445181 TRAPPC3O43617 180 aa25.98■■□□□ 1.75
C9orf3-207ENST00000445181 RHOBTB3O94955 611 aa25.98■■□□□ 1.75
C9orf3-207ENST00000445181 IL18RAPO95256 599 aa25.98■■□□□ 1.75
C9orf3-207ENST00000445181 EFEMP2O95967 443 aa25.98■■□□□ 1.75
C9orf3-207ENST00000445181 ADRB2P07550 413 aa25.98■■□□□ 1.75
C9orf3-207ENST00000445181 SNRPFP62306 86 aaKnown RBP25.98■■□□□ 1.75
C9orf3-207ENST00000445181 POU5F1Q01860 360 aaKnown RBP25.98■■□□□ 1.75
C9orf3-207ENST00000445181 FAM171A1Q5VUB5 890 aa25.98■■□□□ 1.75
C9orf3-207ENST00000445181 CEP57Q86XR8 500 aa25.98■■□□□ 1.75
C9orf3-207ENST00000445181 RNF168Q8IYW5 571 aaPredicted RBP25.98■■□□□ 1.75
C9orf3-207ENST00000445181 BEST2Q8NFU1 509 aa25.98■■□□□ 1.75
C9orf3-207ENST00000445181 PHF7Q9BWX1 381 aaPredicted RBP25.98■■□□□ 1.75
C9orf3-207ENST00000445181 HSPBP1Q9NZL4 362 aa25.98■■□□□ 1.75
C9orf3-207ENST00000445181 NUB1Q9Y5A7 615 aa25.98■■□□□ 1.75
C9orf3-207ENST00000445181 CLIC2O15247 247 aa25.97■■□□□ 1.75
C9orf3-207ENST00000445181 TGFB1I1O43294 461 aa25.97■■□□□ 1.75
C9orf3-207ENST00000445181 PRPF40AO75400 957 aaKnown RBP25.97■■□□□ 1.75
C9orf3-207ENST00000445181 KIF20AO95235 890 aa25.97■■□□□ 1.75
C9orf3-207ENST00000445181 SMC2O95347 1197 aa25.97■■□□□ 1.75
C9orf3-207ENST00000445181 NFICP08651 508 aa25.97■■□□□ 1.75
C9orf3-207ENST00000445181 CYP3A5P20815 502 aa25.97■■□□□ 1.75
C9orf3-207ENST00000445181 UBE2HP62256 183 aa25.97■■□□□ 1.75
C9orf3-207ENST00000445181 DSG1Q02413 1049 aa25.97■■□□□ 1.75
C9orf3-207ENST00000445181 KCNB1Q14721 858 aa25.97■■□□□ 1.75
C9orf3-207ENST00000445181 RNF135Q8IUD6 432 aa25.97■■□□□ 1.75
C9orf3-207ENST00000445181 C3orf58Q8NDZ4 430 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms