RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CLCNKBP51801 687 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 AP3M2P53677 418 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 CYP24A1Q07973 514 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 SMC1AQ14683 1233 aaKnown RBP15.26■□□□□ 0.03
SSBP3-208ENST00000444533 PSMD6Q15008 389 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 UPP1Q16831 310 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 TPD52L1Q16890 204 aaPredicted RBP15.26■□□□□ 0.03
SSBP3-208ENST00000444533 DUOXA2Q1HG44 320 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 SPATA1Q5VX52 437 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 CENPPQ6IPU0 288 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 PDXDC1Q6P996 788 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 INTS8Q75QN2 995 aaKnown RBP15.26■□□□□ 0.03
SSBP3-208ENST00000444533 WDR49Q8IV35 697 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 NELFBQ8WX92 580 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 C18orf25Q96B23 403 aaPredicted RBP15.26■□□□□ 0.03
SSBP3-208ENST00000444533 CCDC127Q96BQ5 260 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 GUCD1Q96NT3 240 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 PDE11AQ9HCR9 933 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 MRPL17Q9NRX2 175 aaKnown RBP15.26■□□□□ 0.03
SSBP3-208ENST00000444533 DPP3Q9NY33 737 aa15.26■□□□□ 0.03
SSBP3-208ENST00000444533 TMEM189-UBE2V1I3L0A0 370 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 MAPK13O15264 365 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 CLSTN1O94985 981 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 LETM1O95202 739 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-208ENST00000444533 POU3F3P20264 500 aaPredicted RBP15.25■□□□□ 0.03
SSBP3-208ENST00000444533 PNPLA4P41247 253 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 CREMQ03060 361 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 NAB2Q15742 525 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 USP41Q3LFD5 358 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 FUT10Q6P4F1 479 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 FAM186BQ8IYM0 893 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 HASPINQ8TF76 798 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 ZNF560Q96MR9 790 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 EMILIN2Q9BXX0 1053 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 NSUN3Q9H649 340 aaKnown RBP15.25■□□□□ 0.03
SSBP3-208ENST00000444533 GOLGA2P5Q9HBQ8 144 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 DMAC2Q9NW81 257 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 TUBGCP4Q9UGJ1 667 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 ITGA11Q9UKX5 1188 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 CTNND2Q9UQB3 1225 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 MYO9BQ13459 2157 aa15.25■□□□□ 0.03
SSBP3-208ENST00000444533 NCK2O43639 380 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 STX10O60499 249 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 B4GALT3O60512 393 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 PHACTR2O75167 634 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 KIF4AO95239 1232 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 CXCL14O95715 111 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 SOD2P04179 222 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 KRT19P08727 400 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 SRGAP2BP0DMP2 458 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 LRPAP1P30533 357 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 GLUD2P49448 558 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 NLRP12P59046 1061 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 MYO1EQ12965 1108 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 SKIV2LQ15477 1246 aaKnown RBP15.24■□□□□ 0.03
SSBP3-208ENST00000444533 ZBTB6Q15916 424 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 PLPP4Q5VZY2 271 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 ANKRD40Q6AI12 368 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 DSTYKQ6XUX3 929 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 CEP57Q86XR8 500 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 CSGALNACT2Q8N6G5 542 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 RABGGTAQ92696 567 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 CGRRF1Q99675 332 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 MKNK1Q9BUB5 465 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 CXCL16Q9H2A7 254 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 STXBP5LQ9Y2K9 1186 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 MTCH2Q9Y6C9 303 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 KIAA1671Q9BY89 1806 aa15.24■□□□□ 0.03
SSBP3-208ENST00000444533 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.23■□□□□ 0.03
SSBP3-208ENST00000444533 SLC16A3O15427 465 aaKnown RBP15.23■□□□□ 0.03
SSBP3-208ENST00000444533 GNA14O95837 355 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 CTSAP10619 480 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 VAMP7P51809 220 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 RBP5P82980 135 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 SOX4Q06945 474 aaPredicted RBP15.23■□□□□ 0.03
SSBP3-208ENST00000444533 BIRC3Q13489 604 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 TRPC3Q13507 836 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 KLHL40Q2TBA0 621 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 SV2CQ496J9 727 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 ZCWPW2Q504Y3 356 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 CT47A1Q5JQC4 288 aaPredicted RBP15.23■□□□□ 0.03
SSBP3-208ENST00000444533 FAM171A1Q5VUB5 890 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 CAVIN1Q6NZI2 390 aaKnown RBP15.23■□□□□ 0.03
SSBP3-208ENST00000444533 ELMSAN1Q6PJG2 1045 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 FOXR2Q6PJQ5 311 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 TMEM173Q86WV6 379 aaPredicted RBP15.23■□□□□ 0.03
SSBP3-208ENST00000444533 ZSWIM2Q8NEG5 633 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 APPL2Q8NEU8 664 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 TMC2Q8TDI7 906 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 MFSD14AQ96MC6 490 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 CEP63Q96MT8 703 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 PAAF1Q9BRP4 392 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 TTPALQ9BTX7 342 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 HERC2P3Q9BVR0 1158 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 MTMR12Q9C0I1 747 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 METTL14Q9HCE5 456 aaKnown RBP15.23■□□□□ 0.03
SSBP3-208ENST00000444533 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.23■□□□□ 0.03
SSBP3-208ENST00000444533 INTS13Q9NVM9 706 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 ANO10Q9NW15 660 aa15.23■□□□□ 0.03
SSBP3-208ENST00000444533 MARCH5Q9NX47 278 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms