RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ZSWIM2Q8NEG5 633 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 ST13P5Q8NFI4 369 aaPredicted RBP11.87□□□□□ -0.51
SF3A1-203ENST00000444440 RSAD2Q8WXG1 361 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 SMG7Q92540 1137 aaKnown RBP11.87□□□□□ -0.51
SF3A1-203ENST00000444440 BICD1Q96G01 975 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 UROC1Q96N76 676 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 STRA6Q9BX79 667 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 RHOBTB2Q9BYZ6 727 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 PANK2Q9BZ23 570 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 PLEKHA4Q9H4M7 779 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 WDR6Q9NNW5 1121 aaKnown RBP11.87□□□□□ -0.51
SF3A1-203ENST00000444440 TFIP11Q9UBB9 837 aaKnown RBP11.87□□□□□ -0.51
SF3A1-203ENST00000444440 USTQ9Y2C2 406 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 HCN4Q9Y3Q4 1203 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 MORC2Q9Y6X9 1032 aaPredicted RBP11.87□□□□□ -0.51
SF3A1-203ENST00000444440 GREB1Q4ZG55 1949 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 TICRRQ7Z2Z1 1910 aa11.87□□□□□ -0.51
SF3A1-203ENST00000444440 NUP210Q8TEM1 1887 aaPredicted RBP11.87□□□□□ -0.51
SF3A1-203ENST00000444440 PTPRDP23468 1912 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 LACTBL1A8MY62 500 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 PPEF2O14830 753 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 HNRNPDLO14979 420 aaKnown RBP11.86□□□□□ -0.51
SF3A1-203ENST00000444440 CCL16O15467 120 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 TBC1D4O60343 1298 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 TBCAO75347 108 aaKnown RBP11.86□□□□□ -0.51
SF3A1-203ENST00000444440 ZMYND10O75800 440 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 KRT18P05783 430 aaKnown RBP11.86□□□□□ -0.51
SF3A1-203ENST00000444440 HSP90AA1P07900 732 aaKnown RBP11.86□□□□□ -0.51
SF3A1-203ENST00000444440 PLA2G5P39877 138 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 MATR3P43243 847 aaKnown RBP eCLIP11.86□□□□□ -0.51
SF3A1-203ENST00000444440 ELAVL2Q12926 359 aaKnown RBP11.86□□□□□ -0.51
SF3A1-203ENST00000444440 RAB33AQ14088 237 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 VARS2Q5ST30 1063 aaKnown RBP11.86□□□□□ -0.51
SF3A1-203ENST00000444440 POTEHQ6S545 545 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 BMP8AQ7Z5Y6 402 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 LINC00301Q8NCQ3 95 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 HDAC7Q8WUI4 952 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 DDX12PQ92771 950 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 STAMQ92783 540 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 PBXIP1Q96AQ6 731 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 PRKD2Q9BZL6 878 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 HCFC1R1Q9NWW0 138 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 ZDHHC7Q9NXF8 308 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 TBC1D7Q9P0N9 293 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 STK17AQ9UEE5 414 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 SORCS3Q9UPU3 1222 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 CDY1Q9Y6F8 540 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 PATJQ8NI35 1801 aa11.86□□□□□ -0.51
SF3A1-203ENST00000444440 A0A0B4J269 797 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 WDR27A2RRH5 827 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 NRG2O14511 850 aaPredicted RBP11.85□□□□□ -0.51
SF3A1-203ENST00000444440 OGTO15294 1046 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 NARSO43776 548 aaKnown RBP11.85□□□□□ -0.51
SF3A1-203ENST00000444440 C1RP00736 705 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 C8AP07357 584 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 ADRB2P07550 413 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 CLTAP09496 248 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 PDIA4P13667 645 aaKnown RBP11.85□□□□□ -0.51
SF3A1-203ENST00000444440 ADSSP30520 456 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 WNT7BP56706 349 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 ROR1Q01973 937 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 CREMQ03060 361 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 MRPL58Q14197 206 aaKnown RBP11.85□□□□□ -0.51
SF3A1-203ENST00000444440 FOXD4L6Q3SYB3 417 aaPredicted RBP11.85□□□□□ -0.51
SF3A1-203ENST00000444440 AXDND1Q5T1B0 1012 aaPredicted RBP11.85□□□□□ -0.51
SF3A1-203ENST00000444440 RRAGBQ5VZM2 374 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 CRELD2Q6UXH1 353 aaPredicted RBP11.85□□□□□ -0.51
SF3A1-203ENST00000444440 FOXD4L3Q6VB84 417 aaPredicted RBP11.85□□□□□ -0.51
SF3A1-203ENST00000444440 GET4Q7L5D6 327 aaPredicted RBP11.85□□□□□ -0.51
SF3A1-203ENST00000444440 PDILTQ8N807 584 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 KRI1Q8N9T8 703 aaKnown RBP11.85□□□□□ -0.51
SF3A1-203ENST00000444440 SPRYD3Q8NCJ5 442 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 PRSS33Q8NF86 280 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 SLC7A14Q8TBB6 771 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 ZSCAN16Q9H4T2 348 aaPredicted RBP11.85□□□□□ -0.51
SF3A1-203ENST00000444440 KCNK12Q9HB15 430 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 SLC38A7Q9NVC3 462 aa11.85□□□□□ -0.51
SF3A1-203ENST00000444440 CPSF3Q9UKF6 684 aaKnown RBP11.85□□□□□ -0.51
SF3A1-203ENST00000444440 ANAPC1Q9H1A4 1944 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 FRMD3A2A2Y4 597 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 H0YCG3 227 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 NFICP08651 508 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 LRPAP1P30533 357 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 GBP2P32456 591 aaPredicted RBP11.84□□□□□ -0.51
SF3A1-203ENST00000444440 RPL9P32969 192 aaKnown RBP11.84□□□□□ -0.51
SF3A1-203ENST00000444440 ACOT2P49753 483 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 MTMR3Q13615 1198 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 E2F4Q16254 413 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 SCARA3Q6AZY7 606 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 JADE1Q6IE81 842 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 SLC8B1Q6J4K2 584 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 OTOP3Q7RTS5 596 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 ZNF720Q7Z2F6 126 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 GRASPQ7Z6J2 395 aaPredicted RBP11.84□□□□□ -0.51
SF3A1-203ENST00000444440 PLCD3Q8N3E9 789 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 FBXL6Q8N531 539 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 GLIS3Q8NEA6 775 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 HPS3Q969F9 1004 aa11.84□□□□□ -0.51
SF3A1-203ENST00000444440 ACSF2Q96CM8 615 aaPredicted RBP11.84□□□□□ -0.51
SF3A1-203ENST00000444440 KIF12Q96FN5 646 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms