RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 GPR65Q8IYL9 337 aa23.77■■□□□ 1.4
TRAF4-205ENST00000444415 LNX1Q8TBB1 728 aaPredicted RBP23.77■■□□□ 1.4
TRAF4-205ENST00000444415 RIN2Q8WYP3 895 aaPredicted RBP23.77■■□□□ 1.4
TRAF4-205ENST00000444415 CBWD1Q9BRT8 395 aa23.77■■□□□ 1.4
TRAF4-205ENST00000444415 DENND4AQ7Z401 1863 aa23.76■■□□□ 1.39
TRAF4-205ENST00000444415 FGFR3P22607 806 aa23.76■■□□□ 1.39
TRAF4-205ENST00000444415 ZP2Q05996 745 aa23.76■■□□□ 1.39
TRAF4-205ENST00000444415 PPP2R3AQ06190 1150 aa23.76■■□□□ 1.39
TRAF4-205ENST00000444415 KYAT1Q16773 422 aa23.76■■□□□ 1.39
TRAF4-205ENST00000444415 FAM26FQ5R3K3 315 aa23.76■■□□□ 1.39
TRAF4-205ENST00000444415 SLFN12LQ6IEE8 588 aa23.76■■□□□ 1.39
TRAF4-205ENST00000444415 C12orf76Q8N812 135 aaPredicted RBP23.76■■□□□ 1.39
TRAF4-205ENST00000444415 PIK3R5Q8WYR1 880 aa23.76■■□□□ 1.39
TRAF4-205ENST00000444415 POMGNT1Q8WZA1 660 aa23.76■■□□□ 1.39
TRAF4-205ENST00000444415 KIF12Q96FN5 646 aa23.76■■□□□ 1.39
TRAF4-205ENST00000444415 PYM1Q9BRP8 204 aaKnown RBP23.76■■□□□ 1.39
TRAF4-205ENST00000444415 TTPALQ9BTX7 342 aa23.76■■□□□ 1.39
TRAF4-205ENST00000444415 EMILIN2Q9BXX0 1053 aa23.76■■□□□ 1.39
TRAF4-205ENST00000444415 RPF1Q9H9Y2 349 aaKnown RBP23.76■■□□□ 1.39
TRAF4-205ENST00000444415 NFICP08651 508 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 KLRC2P26717 231 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 TKTP29401 623 aaKnown RBP23.75■■□□□ 1.39
TRAF4-205ENST00000444415 TPRNQ4KMQ1 711 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 JADE1Q6IE81 842 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 KIAA1841Q6NSI8 718 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 FSIP1Q8NA03 581 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 KHSRPQ92945 711 aaKnown RBP eCLIP23.75■■□□□ 1.39
TRAF4-205ENST00000444415 SAAL1Q96ER3 474 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 FNIP2Q9P278 1114 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 EXOC7Q9UPT5 735 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 PPEF2O14830 753 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 ADAM12O43184 909 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 PRR29P0C7W0 189 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 LRPAP1P30533 357 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 SYKP43405 635 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 RSPO2Q6UXX9 243 aaPredicted RBP23.75■■□□□ 1.39
TRAF4-205ENST00000444415 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.75■■□□□ 1.39
TRAF4-205ENST00000444415 CEP57L1Q8IYX8 460 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 ZNF507Q8TCN5 953 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 SCFD1Q8WVM8 642 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 DDX27Q96GQ7 796 aaKnown RBP23.75■■□□□ 1.39
TRAF4-205ENST00000444415 CLSTN3Q9BQT9 956 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 SSX2IPQ9Y2D8 614 aa23.75■■□□□ 1.39
TRAF4-205ENST00000444415 DOCK6Q96HP0 2047 aa23.74■■□□□ 1.39
TRAF4-205ENST00000444415 TSC2P49815 1807 aa23.74■■□□□ 1.39
TRAF4-205ENST00000444415 PVALEFA0A1B0GWK0 134 aa23.74■■□□□ 1.39
TRAF4-205ENST00000444415 EIF3DO15371 548 aaKnown RBP eCLIP23.74■■□□□ 1.39
TRAF4-205ENST00000444415 HOXB8P17481 243 aaPredicted RBP23.74■■□□□ 1.39
TRAF4-205ENST00000444415 GARTP22102 1010 aa23.74■■□□□ 1.39
TRAF4-205ENST00000444415 RPL9P32969 192 aaKnown RBP23.74■■□□□ 1.39
TRAF4-205ENST00000444415 PPFIBP1Q86W92 1011 aa23.74■■□□□ 1.39
TRAF4-205ENST00000444415 CEP57Q86XR8 500 aa23.74■■□□□ 1.39
TRAF4-205ENST00000444415 GLYCTKQ8IVS8 523 aa23.74■■□□□ 1.39
TRAF4-205ENST00000444415 EFCAB13Q8IY85 973 aa23.74■■□□□ 1.39
TRAF4-205ENST00000444415 FBXL18Q96ME1 805 aa23.74■■□□□ 1.39
TRAF4-205ENST00000444415 UBQLN1Q9UMX0 589 aaKnown RBP23.74■■□□□ 1.39
TRAF4-205ENST00000444415 C19orf67A6NJJ6 358 aa23.73■■□□□ 1.39
TRAF4-205ENST00000444415 TNFRSF10AO00220 468 aa23.73■■□□□ 1.39
TRAF4-205ENST00000444415 TGFB1I1O43294 461 aa23.73■■□□□ 1.39
TRAF4-205ENST00000444415 ADH1AP07327 375 aa23.73■■□□□ 1.39
TRAF4-205ENST00000444415 SRGAP2BP0DMP2 458 aa23.73■■□□□ 1.39
TRAF4-205ENST00000444415 CYP3A5P20815 502 aa23.73■■□□□ 1.39
TRAF4-205ENST00000444415 ELAVL2Q12926 359 aaKnown RBP23.73■■□□□ 1.39
TRAF4-205ENST00000444415 SPATA1Q5VX52 437 aa23.73■■□□□ 1.39
TRAF4-205ENST00000444415 LILRA6Q6PI73 481 aa23.73■■□□□ 1.39
TRAF4-205ENST00000444415 ADHFE1Q8IWW8 467 aa23.73■■□□□ 1.39
TRAF4-205ENST00000444415 KIAA0895Q8NCT3 520 aa23.73■■□□□ 1.39
TRAF4-205ENST00000444415 FAM212AQ96EL1 285 aa23.73■■□□□ 1.39
TRAF4-205ENST00000444415 TMEM206Q9H813 350 aa23.73■■□□□ 1.39
TRAF4-205ENST00000444415 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.73■■□□□ 1.396e-6■■□□□ 13.7
TRAF4-205ENST00000444415 TGM5O43548 720 aa23.72■■□□□ 1.39
TRAF4-205ENST00000444415 WEE2P0C1S8 567 aa23.72■■□□□ 1.39
TRAF4-205ENST00000444415 POSTNQ15063 836 aa23.72■■□□□ 1.39
TRAF4-205ENST00000444415 PSMD5Q16401 504 aa23.72■■□□□ 1.39
TRAF4-205ENST00000444415 SYCP3Q8IZU3 236 aa23.72■■□□□ 1.39
TRAF4-205ENST00000444415 FAM84AQ96KN4 292 aa23.72■■□□□ 1.39
TRAF4-205ENST00000444415 FAM213AQ9BRX8 229 aa23.72■■□□□ 1.39
TRAF4-205ENST00000444415 ADAM7Q9H2U9 754 aa23.72■■□□□ 1.39
TRAF4-205ENST00000444415 PCIF1Q9H4Z3 704 aa23.72■■□□□ 1.39
TRAF4-205ENST00000444415 SLC39A2Q9NP94 309 aa23.72■■□□□ 1.39
TRAF4-205ENST00000444415 MAN1C1Q9NR34 630 aa23.72■■□□□ 1.39
TRAF4-205ENST00000444415 DZANK1Q9NVP4 752 aa23.72■■□□□ 1.39
TRAF4-205ENST00000444415 PRKAG3Q9UGI9 489 aa23.72■■□□□ 1.39
TRAF4-205ENST00000444415 USP25Q9UHP3 1055 aa23.72■■□□□ 1.39
TRAF4-205ENST00000444415 GOLGA8IPA6NC78 632 aa23.71■■□□□ 1.39
TRAF4-205ENST00000444415 GOLGA8JA6NMD2 632 aa23.71■■□□□ 1.39
TRAF4-205ENST00000444415 AARSP49588 968 aaKnown RBP eCLIP23.71■■□□□ 1.39
TRAF4-205ENST00000444415 POU5F1Q01860 360 aaKnown RBP23.71■■□□□ 1.39
TRAF4-205ENST00000444415 STK4Q13043 487 aa23.71■■□□□ 1.39
TRAF4-205ENST00000444415 BMT2Q1RMZ1 405 aa23.71■■□□□ 1.39
TRAF4-205ENST00000444415 KMT5BQ4FZB7 885 aa23.71■■□□□ 1.39
TRAF4-205ENST00000444415 RARS2Q5T160 578 aaKnown RBP23.71■■□□□ 1.39
TRAF4-205ENST00000444415 SCARA3Q6AZY7 606 aa23.71■■□□□ 1.39
TRAF4-205ENST00000444415 PALB2Q86YC2 1186 aa23.71■■□□□ 1.39
TRAF4-205ENST00000444415 BRSK2Q8IWQ3 736 aa23.71■■□□□ 1.39
TRAF4-205ENST00000444415 CD302Q8IX05 232 aa23.71■■□□□ 1.39
TRAF4-205ENST00000444415 TMEM87AQ8NBN3 555 aa23.71■■□□□ 1.39
TRAF4-205ENST00000444415 ASB7Q9H672 318 aa23.71■■□□□ 1.39
TRAF4-205ENST00000444415 MTRRQ9UBK8 725 aa23.71■■□□□ 1.39
TRAF4-205ENST00000444415 FAM50BQ9Y247 325 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms