RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 TEX9Q8N6V9 391 aa16.42■□□□□ 0.22
AP1S3-206ENST00000443700 TMEM237Q96Q45 408 aa16.42■□□□□ 0.22
AP1S3-206ENST00000443700 A8MUI8 341 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 RARRES1P49788 294 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 GCNT1Q02742 428 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 MGAT5Q09328 741 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 MKRN4PQ13434 485 aaPredicted RBP16.41■□□□□ 0.22
AP1S3-206ENST00000443700 AOC3Q16853 763 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 GRIPAP1Q4V328 841 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 PPP1R2P3Q6NXS1 205 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 MAEAQ7L5Y9 396 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 VSIG1Q86XK7 387 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 RHOT1Q8IXI2 618 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 MCOLN2Q8IZK6 566 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 ZCCHC9Q8N567 271 aaKnown RBP16.41■□□□□ 0.22
AP1S3-206ENST00000443700 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.41■□□□□ 0.22
AP1S3-206ENST00000443700 SEMA4DQ92854 862 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 DDX27Q96GQ7 796 aaKnown RBP16.41■□□□□ 0.22
AP1S3-206ENST00000443700 DNAJC17Q9NVM6 304 aaKnown RBP16.41■□□□□ 0.22
AP1S3-206ENST00000443700 RAB20Q9NX57 234 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 TBK1Q9UHD2 729 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 RPL26L1Q9UNX3 145 aaKnown RBP16.41■□□□□ 0.22
AP1S3-206ENST00000443700 NEU2Q9Y3R4 380 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 MROH7Q68CQ1 1323 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 EXOC1LA0A1B0GW35 172 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 HNRNPCL1O60812 293 aaKnown RBP16.41■□□□□ 0.22
AP1S3-206ENST00000443700 PROSCO94903 275 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 KLF1Q13351 362 aaPredicted RBP16.41■□□□□ 0.22
AP1S3-206ENST00000443700 TRIP13Q15645 432 aaPredicted RBP16.41■□□□□ 0.22
AP1S3-206ENST00000443700 CMPK2Q5EBM0 449 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 STRIP1Q5VSL9 837 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 FAM160B2Q86V87 743 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 KIAA0825Q8IV33 1275 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 CYP4X1Q8N118 509 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 PARD3BQ8TEW8 1205 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 SH3TC2Q8TF17 1288 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 MYLK2Q9H1R3 596 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 SERPINA10Q9UK55 444 aa16.41■□□□□ 0.22
AP1S3-206ENST00000443700 SMCHD1A6NHR9 2005 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 DDX39AO00148 427 aaKnown RBP16.4■□□□□ 0.22
AP1S3-206ENST00000443700 KIF3CO14782 793 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 PLA2G6O60733 806 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 SMNDC1O75940 238 aaKnown RBP eCLIP16.4■□□□□ 0.22
AP1S3-206ENST00000443700 ASMTLO95671 621 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 CETPP11597 493 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 UNGP13051 313 aaPredicted RBP16.4■□□□□ 0.22
AP1S3-206ENST00000443700 KRT5P13647 590 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 NPR1P16066 1061 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 RRM1P23921 792 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 ALDH1B1P30837 517 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 MAGEA4P43358 317 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 QARSP47897 775 aaKnown RBP16.4■□□□□ 0.22
AP1S3-206ENST00000443700 BPIFB4P59827 614 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 TAF11Q15544 211 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 LIN9Q5TKA1 542 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 TRABD2AQ86V40 505 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 KATNAL2Q8IYT4 538 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 SPICE1Q8N0Z3 855 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 MAML1Q92585 1016 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 DHX38Q92620 1227 aaKnown RBP16.4■□□□□ 0.22
AP1S3-206ENST00000443700 LRRC37BQ96QE4 947 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 ACP6Q9NPH0 428 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 HERC5Q9UII4 1024 aaKnown RBP16.4■□□□□ 0.22
AP1S3-206ENST00000443700 CORO1CQ9ULV4 474 aaPredicted RBP16.4■□□□□ 0.22
AP1S3-206ENST00000443700 PHTF1Q9UMS5 762 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 TMX2Q9Y320 296 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 ZHX2Q9Y6X8 837 aa16.4■□□□□ 0.22
AP1S3-206ENST00000443700 GOLGA8IPA6NC78 632 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 GOLGA8JA6NMD2 632 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 GRIN3BO60391 1043 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 FOXN2P32314 431 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 VPS41P49754 854 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 BLMHQ13867 455 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 TRIM72Q6ZMU5 477 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 FAM47EQ6ZV65 393 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 CBWD2Q8IUF1 395 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 MAP4K3Q8IVH8 894 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 CFAP61Q8NHU2 1237 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 LRRC8CQ8TDW0 803 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 ERP27Q96DN0 273 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 NGLY1Q96IV0 654 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 SMC6Q96SB8 1091 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 DEFB129Q9H1M3 183 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 RNPEPL1Q9HAU8 725 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 C1orf112Q9NSG2 853 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 TRIM33Q9UPN9 1127 aa16.39■□□□□ 0.21
AP1S3-206ENST00000443700 PPP1R12AO14974 1030 aaPredicted RBP16.38■□□□□ 0.21
AP1S3-206ENST00000443700 SLC16A4O15374 487 aa16.38■□□□□ 0.21
AP1S3-206ENST00000443700 RALAP11233 206 aa16.38■□□□□ 0.21
AP1S3-206ENST00000443700 NSFP46459 744 aaKnown RBP16.38■□□□□ 0.21
AP1S3-206ENST00000443700 PEX3P56589 373 aa16.38■□□□□ 0.21
AP1S3-206ENST00000443700 MOGSQ13724 837 aa16.38■□□□□ 0.21
AP1S3-206ENST00000443700 RASA2Q15283 850 aa16.38■□□□□ 0.21
AP1S3-206ENST00000443700 PDK4Q16654 411 aa16.38■□□□□ 0.21
AP1S3-206ENST00000443700 CAPRIN2Q6IMN6 1127 aaKnown RBP16.38■□□□□ 0.21
AP1S3-206ENST00000443700 GSTA5Q7RTV2 222 aa16.38■□□□□ 0.21
AP1S3-206ENST00000443700 APLFQ8IW19 511 aaPredicted RBP16.38■□□□□ 0.21
AP1S3-206ENST00000443700 ANKLE1Q8NAG6 615 aa16.38■□□□□ 0.21
AP1S3-206ENST00000443700 EXD1Q8NHP7 514 aa16.38■□□□□ 0.21
AP1S3-206ENST00000443700 SPDL1Q96EA4 605 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms