RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 SHCBP1LQ9BZQ2 653 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 PTTG2Q9NZH5 202 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 RSL24D1Q9UHA3 163 aaKnown RBP10.85□□□□□ -0.67
LIN54-202ENST00000442461 TAF6LQ9Y6J9 622 aa10.85□□□□□ -0.67
LIN54-202ENST00000442461 NUP153P49790 1475 aaKnown RBP10.85□□□□□ -0.67
LIN54-202ENST00000442461 A0A1B0GW55 424 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 RIPK2O43353 540 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 CIAO1O76071 339 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 ALBP02768 609 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 SHBGP04278 402 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 DUX4L2P0CJ85 424 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 DUX4L3P0CJ86 424 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 DUX4L4P0CJ87 422 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 DUX4L5P0CJ88 424 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 DUX4L6P0CJ89 424 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 DUX4L7P0CJ90 424 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 KCNA2P16389 499 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 BNIP1Q12981 228 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 NR1D2Q14995 579 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 TXNRD1Q16881 649 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 SGSM1Q2NKQ1 1148 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 ZNF746Q6NUN9 644 aaPredicted RBP10.84□□□□□ -0.67
LIN54-202ENST00000442461 LY9Q9HBG7 655 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 DUX4Q9UBX2 424 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 TTLL3Q9Y4R7 772 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 SAC3D1A6NKF1 404 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 PP2D1A8MPX8 630 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 A8MUI8 341 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 GAS7O60861 476 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 LDHAP00338 332 aaKnown RBP10.84□□□□□ -0.67
LIN54-202ENST00000442461 NR3C1P04150 777 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 TRIM49P0CI25 452 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 TRIM49CP0CI26 452 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 NLRP11P59045 1033 aaKnown RBP10.84□□□□□ -0.67
LIN54-202ENST00000442461 MARCH10Q8NA82 808 aaPredicted RBP10.84□□□□□ -0.67
LIN54-202ENST00000442461 ANKRD36BP1Q96IX9 119 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 CSRNP1Q96S65 589 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 MRPS26Q9BYN8 205 aaKnown RBP10.84□□□□□ -0.67
LIN54-202ENST00000442461 NAALADL1Q9UQQ1 740 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 STARD13Q9Y3M8 1113 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 CTTNBP2Q8WZ74 1663 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 ZNF608Q9ULD9 1512 aaPredicted RBP10.84□□□□□ -0.67
LIN54-202ENST00000442461 PLEKHA8P1O95397 391 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 PYGMP11217 842 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 ACAP1Q15027 740 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 TBC1D10CQ8IV04 446 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 CLEC4FQ8N1N0 589 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 KCTD6Q8NC69 237 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 OR9Q1Q8NGQ5 310 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 KANSL2Q9H9L4 492 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 NAGPAQ9UK23 515 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 PCDHB4Q9Y5E5 795 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 CES2O00748 559 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 TRMUO75648 421 aaKnown RBP10.84□□□□□ -0.67
LIN54-202ENST00000442461 ANPEPP15144 967 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 TYK2P29597 1187 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 PTENP60484 403 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 COASYQ13057 564 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 PTK7Q13308 1070 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 MAPK11Q15759 364 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 CCDC85BQ15834 202 aaPredicted RBP10.84□□□□□ -0.67
LIN54-202ENST00000442461 THEMISQ8N1K5 641 aaPredicted RBP10.84□□□□□ -0.67
LIN54-202ENST00000442461 DNAAF3Q8N9W5 541 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 DCAF5Q96JK2 942 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 FAM111AQ96PZ2 611 aa10.84□□□□□ -0.67
LIN54-202ENST00000442461 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.84□□□□□ -0.67
LIN54-202ENST00000442461 TRPM2O94759 1503 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 GRIN2DO15399 1336 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 MROH5Q6ZUA9 1318 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 EIF4G3O43432 1585 aaKnown RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 GTPBP10A4D1E9 387 aaKnown RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 TBC1D4O60343 1298 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 NUDT2P50583 147 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 EIF6P56537 245 aaKnown RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 GEMIN4P57678 1058 aaKnown RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 TRAF2Q12933 501 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 MTA1Q13330 715 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 TRIM25Q14258 630 aaKnown RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 CHI3L2Q15782 390 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 USH1GQ495M9 461 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 LMBRD2Q68DH5 695 aaPredicted RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 ZBTB49Q6ZSB9 765 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 C3orf62Q6ZUJ4 267 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 FOXP4Q8IVH2 680 aaPredicted RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 CCNYL1Q8N7R7 359 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 DQX1Q8TE96 717 aaKnown RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 BHMTQ93088 406 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 CNDP1Q96KN2 507 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 INTS13Q9NVM9 706 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 TRNAU1APQ9NX07 287 aaKnown RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 GTSE1Q9NYZ3 720 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 THRAP3Q9Y2W1 955 aaKnown RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 GMEB1Q9Y692 573 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 TRIM64CA6NLI5 447 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 IDH3BO43837 385 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 RAG1P15918 1043 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 RFX1P22670 979 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 NFKBIAP25963 317 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 CNPY1Q3B7I2 92 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 PDCD4Q53EL6 469 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms