RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 SOX4Q06945 474 aaPredicted RBP12.86□□□□□ -0.35
TTC28-203ENST00000442232 KYAT1Q16773 422 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 XKR4Q5GH76 650 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 VARS2Q5ST30 1063 aaKnown RBP12.86□□□□□ -0.35
TTC28-203ENST00000442232 ZNF280DQ6N043 979 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 ALKAL1Q6UXT8 129 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 BRAPQ7Z569 592 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 GPBP1Q86WP2 473 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 ELMOD1Q8N336 334 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 DTWD2Q8NBA8 298 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 TMEM161BQ8NDZ6 487 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 APPL2Q8NEU8 664 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 GPR152Q8TDT2 470 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 SHDQ96IW2 340 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 PNMA5Q96PV4 448 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 NTPCRQ9BSD7 190 aaKnown RBP12.86□□□□□ -0.35
TTC28-203ENST00000442232 TBC1D17Q9HA65 648 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 ARHGEF3Q9NR81 526 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 KCNH3Q9ULD8 1083 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 ODF2LQ9ULJ1 636 aa12.86□□□□□ -0.35
TTC28-203ENST00000442232 K7ENM7 598 aa12.85□□□□□ -0.35
TTC28-203ENST00000442232 HNRNPDLO14979 420 aaKnown RBP12.85□□□□□ -0.35
TTC28-203ENST00000442232 XPOTO43592 962 aaKnown RBP12.85□□□□□ -0.35
TTC28-203ENST00000442232 TBCAO75347 108 aaKnown RBP12.85□□□□□ -0.35
TTC28-203ENST00000442232 CLTAP09496 248 aa12.85□□□□□ -0.35
TTC28-203ENST00000442232 NPR3P17342 541 aa12.85□□□□□ -0.35
TTC28-203ENST00000442232 MARCKSP29966 332 aaPredicted RBP12.85□□□□□ -0.35
TTC28-203ENST00000442232 ABCD1P33897 745 aa12.85□□□□□ -0.35
TTC28-203ENST00000442232 SLC12A3P55017 1021 aa12.85□□□□□ -0.35
TTC28-203ENST00000442232 ROR1Q01973 937 aa12.85□□□□□ -0.35
TTC28-203ENST00000442232 CACNB1Q02641 598 aaPredicted RBP12.85□□□□□ -0.35
TTC28-203ENST00000442232 PPP2R3AQ06190 1150 aa12.85□□□□□ -0.35
TTC28-203ENST00000442232 MCL1Q07820 350 aa12.85□□□□□ -0.35
TTC28-203ENST00000442232 ANGPT1Q15389 498 aa12.85□□□□□ -0.35
TTC28-203ENST00000442232 TMEM119Q4V9L6 283 aa12.85□□□□□ -0.35
TTC28-203ENST00000442232 C3orf58Q8NDZ4 430 aa12.85□□□□□ -0.35
TTC28-203ENST00000442232 FGF13Q92913 245 aa12.85□□□□□ -0.35
TTC28-203ENST00000442232 ZMAT2Q96NC0 199 aaKnown RBP12.85□□□□□ -0.35
TTC28-203ENST00000442232 ZHX3Q9H4I2 956 aa12.85□□□□□ -0.35
TTC28-203ENST00000442232 SLC2A4RGQ9NR83 387 aa12.85□□□□□ -0.35
TTC28-203ENST00000442232 MRPS23Q9Y3D9 190 aaKnown RBP12.85□□□□□ -0.35
TTC28-203ENST00000442232 KRBA1A5PL33 1030 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 PI15O43692 258 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 CPB1P15086 417 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 LONP1P36776 959 aaKnown RBP12.84□□□□□ -0.35
TTC28-203ENST00000442232 NBL1P41271 181 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 NCKAP1LP55160 1127 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 PFKPQ01813 784 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 DHX8Q14562 1220 aaKnown RBP12.84□□□□□ -0.35
TTC28-203ENST00000442232 CTXN3Q4LDR2 81 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 SLC8B1Q6J4K2 584 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 PHLDB3Q6NSJ2 640 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 PARM1Q6UWI2 310 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 HAUS6Q7Z4H7 955 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 MYCT1Q8N699 235 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 ZNF461Q8TAF7 563 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 ITFG1Q8TB96 612 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 ING5Q8WYH8 240 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 C18orf25Q96B23 403 aaPredicted RBP12.84□□□□□ -0.35
TTC28-203ENST00000442232 KIF12Q96FN5 646 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 ZBTB45Q96K62 511 aaPredicted RBP12.84□□□□□ -0.35
TTC28-203ENST00000442232 SUSD3Q96L08 255 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 PLEKHA5Q9HAU0 1116 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 PARVGQ9HBI0 331 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 CYP4F11Q9HBI6 524 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 HCFC1R1Q9NWW0 138 aa12.84□□□□□ -0.35
TTC28-203ENST00000442232 ZFHX2Q9C0A1 2572 aaPredicted RBP12.83□□□□□ -0.35
TTC28-203ENST00000442232 NPHP3-ACAD11A0A0J9YXS1 232 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 VPS37CA5D8V6 355 aaPredicted RBP12.83□□□□□ -0.36
TTC28-203ENST00000442232 PROB1E7EW31 1015 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 ABLIM1O14639 778 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 CD2BP2O95400 341 aaKnown RBP12.83□□□□□ -0.36
TTC28-203ENST00000442232 RHOP08100 348 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 CXCL8P10145 99 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 PTPN2P17706 415 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 PDCP20941 246 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 SEZ6Q53EL9 994 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 SPECC1Q5M775 1068 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 TPGS2Q68CL5 300 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 IQCEQ6IPM2 695 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 CD300LGQ6UXG3 332 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 RSPO2Q6UXX9 243 aaPredicted RBP12.83□□□□□ -0.36
TTC28-203ENST00000442232 FRMD5Q7Z6J6 570 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 NPAS3Q8IXF0 933 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 ST13P5Q8NFI4 369 aaPredicted RBP12.83□□□□□ -0.36
TTC28-203ENST00000442232 FGF14Q92915 247 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 NKD2Q969F2 451 aaPredicted RBP12.83□□□□□ -0.36
TTC28-203ENST00000442232 TBC1D32Q96NH3 1257 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 CORO1BQ9BR76 489 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 REEP2Q9BRK0 252 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 RPF1Q9H9Y2 349 aaKnown RBP12.83□□□□□ -0.36
TTC28-203ENST00000442232 GDE1Q9NZC3 331 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 DNMT3BQ9UBC3 853 aaKnown RBP12.83□□□□□ -0.36
TTC28-203ENST00000442232 TUBGCP4Q9UGJ1 667 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 FBXL5Q9UKA1 691 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 UBQLN1Q9UMX0 589 aaKnown RBP12.83□□□□□ -0.36
TTC28-203ENST00000442232 PCDHB8Q9UN66 801 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 SIT1Q9Y3P8 196 aa12.83□□□□□ -0.36
TTC28-203ENST00000442232 ARHGEF37A1IGU5 675 aa12.82□□□□□ -0.36
TTC28-203ENST00000442232 WDR27A2RRH5 827 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms