RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 KLHL30Q0D2K2 578 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 SNX17Q15036 470 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 PTPN14Q15678 1187 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 GPIHBP1Q8IV16 184 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 WDR49Q8IV35 697 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 SEMA4DQ92854 862 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 NT5C1BQ96P26 610 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 UBE2TQ9NPD8 197 aaPredicted RBP8.7□□□□□ -1.02
CCDC39-201ENST00000442201 AJAP1Q9UKB5 411 aaPredicted RBP8.7□□□□□ -1.02
CCDC39-201ENST00000442201 BZW2Q9Y6E2 419 aaKnown RBP8.7□□□□□ -1.02
CCDC39-201ENST00000442201 A0A087WUV0 522 aaPredicted RBP8.69□□□□□ -1.02
CCDC39-201ENST00000442201 MOXD2PA6NHM9 499 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 AKR1B10O60218 316 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 C4BPAP04003 597 aaKnown RBP8.69□□□□□ -1.02
CCDC39-201ENST00000442201 FERP16591 822 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 HSPA6P17066 643 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 EIF4A3P38919 411 aaKnown RBP8.69□□□□□ -1.02
CCDC39-201ENST00000442201 JAM2P57087 298 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 KRT83P78385 493 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 DRAP1Q14919 205 aaPredicted RBP8.69□□□□□ -1.02
CCDC39-201ENST00000442201 ENOX2Q16206 610 aaKnown RBP8.69□□□□□ -1.02
CCDC39-201ENST00000442201 HGSNATQ68CP4 663 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 NAIF1Q69YI7 327 aaPredicted RBP8.69□□□□□ -1.02
CCDC39-201ENST00000442201 TADA2BQ86TJ2 420 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 SERINC5Q86VE9 423 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 PPM1KQ8N3J5 372 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 ACRBPQ8NEB7 543 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 CCDC26Q8TAB7 109 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 GLT1D1Q96MS3 346 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 CELF4Q9BZC1 486 aaKnown RBP8.69□□□□□ -1.02
CCDC39-201ENST00000442201 PTPRJQ12913 1337 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 F8VZ95 297 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 ZC3H11AO75152 810 aaKnown RBP eCLIP8.69□□□□□ -1.02
CCDC39-201ENST00000442201 PHACTR2O75167 634 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 LRRN2O75325 713 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 IL18RAPO95256 599 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 PLEKP08567 350 aaPredicted RBP8.69□□□□□ -1.02
CCDC39-201ENST00000442201 STAG3L1P0CL83 205 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 AXLP30530 894 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 PIK3CAP42336 1068 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 ITGA7Q13683 1181 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 SPA17Q15506 151 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 ARHGAP44Q17R89 818 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 DCAF4L1Q3SXM0 396 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 WDR44Q5JSH3 913 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 TDRD10Q5VZ19 366 aaKnown RBP8.69□□□□□ -1.02
CCDC39-201ENST00000442201 LHX8Q68G74 356 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 NOTUMQ6P988 496 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 ARRDC4Q8NCT1 418 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 FAM84AQ96KN4 292 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 TSEN34Q9BSV6 310 aaKnown RBP8.69□□□□□ -1.02
CCDC39-201ENST00000442201 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.69□□□□□ -1.02
CCDC39-201ENST00000442201 EVPLQ92817 2033 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 B4GALT4O60513 344 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 HLA-DRAP01903 254 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 CXCL8P10145 99 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 HOXA11P31270 313 aaPredicted RBP8.69□□□□□ -1.02
CCDC39-201ENST00000442201 SOX5P35711 763 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 KIF11P52732 1056 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 MFAP3P55082 362 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 MRPS6P82932 125 aaKnown RBP8.69□□□□□ -1.02
CCDC39-201ENST00000442201 DUOXA2Q1HG44 320 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 SLC27A1Q6PCB7 646 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 IRF2BP2Q7Z5L9 587 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 ARHGEF19Q8IW93 802 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 OR5B17Q8NGF7 314 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 TMEM40Q8WWA1 233 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 C1orf112Q9NSG2 853 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 MCM8Q9UJA3 840 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 NOD1Q9Y239 953 aa8.69□□□□□ -1.02
CCDC39-201ENST00000442201 GRIN2DO15399 1336 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 RTN2O75298 545 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 GFPT2O94808 682 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 TMEM191BP0C7N4 346 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 USP8P40818 1118 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 PRKCIP41743 596 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 CD151P48509 253 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 TFAMQ00059 246 aaKnown RBP8.68□□□□□ -1.02
CCDC39-201ENST00000442201 PTPN11Q06124 597 aaPredicted RBP8.68□□□□□ -1.02
CCDC39-201ENST00000442201 SLC5A9Q2M3M2 681 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 SH3TC2Q8TF17 1288 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 FAM81BQ96LP2 452 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 TSPAN18Q96SJ8 248 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 IMPG2Q9BZV3 1241 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC39-201ENST00000442201 TRPV2Q9Y5S1 764 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 OAS2P29728 719 aaKnown RBP8.68□□□□□ -1.02
CCDC39-201ENST00000442201 GRM5P41594 1212 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 PTGISQ16647 500 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 ARHGAP29Q52LW3 1261 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 TTC19Q6DKK2 380 aaPredicted RBP8.68□□□□□ -1.02
CCDC39-201ENST00000442201 ENOSF1Q7L5Y1 443 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 TRAPPC11Q7Z392 1133 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 TMEM192Q8IY95 271 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 ZNF483Q8TF39 744 aaPredicted RBP8.68□□□□□ -1.02
CCDC39-201ENST00000442201 ACAP3Q96P50 834 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 SH3GL3Q99963 347 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 TRIM6Q9C030 488 aaPredicted RBP8.68□□□□□ -1.02
CCDC39-201ENST00000442201 ASB7Q9H672 318 aa8.68□□□□□ -1.02
CCDC39-201ENST00000442201 HAUS4Q9H6D7 363 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms