RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SLIT1O75093 1534 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 LRRC7Q96NW7 1537 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 USP6P35125 1406 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 A0A087X1B8 175 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 ALG1L2C9J202 215 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 RHOBTB3O94955 611 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 EYA4O95677 639 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 MAP4K4O95819 1239 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 GAAP10253 952 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 HNRNPLP14866 589 aaKnown RBP eCLIP4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 TBX4P57082 545 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 ADAM8P78325 824 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 MXRA7P84157 204 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 TWISTNBQ3B726 338 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 CRB2Q5IJ48 1285 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 CREB3L3Q68CJ9 461 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 SPTY2D1Q68D10 685 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 NAIF1Q69YI7 327 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 SULT6B1Q6IMI4 303 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 FAM180AQ6UWF9 173 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 HTR3DQ70Z44 454 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 PDZD4Q76G19 769 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 FAM83AQ86UY5 434 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 MB21D1Q8N884 522 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 OR5M3Q8NGP4 307 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 SLC25A43Q8WUT9 341 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 HAS1Q92839 578 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 CLIP3Q96DZ5 547 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 CHFRQ96EP1 664 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 IL17RAQ96F46 866 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 CEP89Q96ST8 783 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 THUMPD2Q9BTF0 503 aaKnown RBP4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 API5Q9BZZ5 524 aaKnown RBP4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 MMRN2Q9H8L6 949 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 ZBTB40Q9NUA8 1239 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 GABBR1Q9UBS5 961 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 MCM8Q9UJA3 840 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 RIPOR2Q9Y4F9 1068 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 NUMBLQ9Y6R0 609 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 PTCH1Q13635 1447 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 SSH2Q76I76 1423 aa4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P11-201ENST00000440127 PIK3R4Q99570 1358 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 C3P01024 1663 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 ZNF891A8MT65 544 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 ELL2O00472 640 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 CHL1O00533 1208 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 RAMP2O60895 175 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 ULK1O75385 1050 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 PFKMP08237 780 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 AMPHP49418 695 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 SCNN1GP51170 649 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 DGCR2P98153 550 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 KRTAP1-1Q07627 177 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 TOB2Q14106 344 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 DCTN1Q14203 1278 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 DDB1Q16531 1140 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 SMN1Q16637 294 aaKnown RBP4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 RABL3Q5HYI8 236 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 LY6G5CQ5SRR4 150 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 Q6ZRM9 215 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 DOK3Q7L591 496 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 STRA8Q7Z7C7 330 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 SMC5Q8IY18 1101 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 TSPYL6Q8N831 410 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 C8orf58Q8NAV2 365 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 OR14C36Q8NHC7 312 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 PPP1R14CQ8TAE6 165 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 GAB3Q8WWW8 586 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 USP7Q93009 1102 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 LENG9Q96B70 501 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 C8orf48Q96LL4 319 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 GPR101Q96P66 508 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 MNTQ99583 582 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 NRDE2Q9H7Z3 1164 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 UPF2Q9HAU5 1272 aaKnown RBP4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 ING1Q9UK53 422 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 OVOS2A0A0J9YW53 1432 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 OVOS2Q6IE36 1432 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 DIP2AQ14689 1571 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 MON2Q7Z3U7 1717 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 MAP3K19Q56UN5 1328 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 AKAP12Q02952 1782 aa4.17□□□□□ -1.74
HMGB3P11-201ENST00000440127 SBNO1A3KN83 1393 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 ARHGEF10O15013 1369 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 ANKARQ7Z5J8 1434 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 PRR5-ARHGAP8B1AHC4 643 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 HTATSF1O43719 755 aaKnown RBP4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 KDM1AO60341 852 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 ALDH1L1O75891 902 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 SEC24DO94855 1032 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 SPATA31D3P0C874 917 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 MGAT1P26572 445 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 GZMKP49863 264 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 NUCB1Q02818 461 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 PPARAQ07869 468 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 BECN1Q14457 450 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 PTPAQ15257 358 aa4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 TTF1Q15361 905 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P11-201ENST00000440127 TERF2Q15554 542 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms