RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.45□□□□□ -1.06
APP-209ENST00000440126 C11orf70Q9BRQ4 267 aa8.45□□□□□ -1.06
APP-209ENST00000440126 TSKSQ9UJT2 592 aa8.45□□□□□ -1.06
APP-209ENST00000440126 USTQ9Y2C2 406 aa8.45□□□□□ -1.06
APP-209ENST00000440126 MAFBQ9Y5Q3 323 aaPredicted RBP8.45□□□□□ -1.06
APP-209ENST00000440126 INO80B-WBP1J3KQ70 363 aa8.45□□□□□ -1.06
APP-209ENST00000440126 SOCS7O14512 581 aa8.45□□□□□ -1.06
APP-209ENST00000440126 SPOPO43791 374 aa8.45□□□□□ -1.06
APP-209ENST00000440126 CST3P01034 146 aaPredicted RBP8.45□□□□□ -1.06
APP-209ENST00000440126 ZNF286BP0CG31 522 aa8.45□□□□□ -1.06
APP-209ENST00000440126 RDXP35241 583 aaKnown RBP8.45□□□□□ -1.06
APP-209ENST00000440126 PDE6CP51160 858 aa8.45□□□□□ -1.06
APP-209ENST00000440126 MFAP3P55082 362 aa8.45□□□□□ -1.06
APP-209ENST00000440126 ZRSR2Q15696 482 aaKnown RBP8.45□□□□□ -1.06
APP-209ENST00000440126 C10orf76Q5T2E6 689 aa8.45□□□□□ -1.06
APP-209ENST00000440126 RIOX2Q8IUF8 465 aa8.45□□□□□ -1.06
APP-209ENST00000440126 C12orf56Q8IXR9 622 aa8.45□□□□□ -1.06
APP-209ENST00000440126 CHST13Q8NET6 341 aa8.45□□□□□ -1.06
APP-209ENST00000440126 KCNV2Q8TDN2 545 aa8.45□□□□□ -1.06
APP-209ENST00000440126 SPIRE2Q8WWL2 714 aa8.45□□□□□ -1.06
APP-209ENST00000440126 SHC3Q92529 594 aa8.45□□□□□ -1.06
APP-209ENST00000440126 ACSF2Q96CM8 615 aaPredicted RBP8.45□□□□□ -1.06
APP-209ENST00000440126 CYFIP2Q96F07 1278 aa8.45□□□□□ -1.06
APP-209ENST00000440126 HES6Q96HZ4 224 aa8.45□□□□□ -1.06
APP-209ENST00000440126 CDHR1Q96JP9 859 aa8.45□□□□□ -1.06
APP-209ENST00000440126 MFSD14AQ96MC6 490 aa8.45□□□□□ -1.06
APP-209ENST00000440126 IWS1Q96ST2 819 aa8.45□□□□□ -1.06
APP-209ENST00000440126 SENP7Q9BQF6 1050 aa8.45□□□□□ -1.06
APP-209ENST00000440126 INO80BQ9C086 356 aaPredicted RBP8.45□□□□□ -1.06
APP-209ENST00000440126 MTMR12Q9C0I1 747 aa8.45□□□□□ -1.06
APP-209ENST00000440126 ST6GALNAC4Q9H4F1 302 aa8.45□□□□□ -1.06
APP-209ENST00000440126 DHX33Q9H6R0 707 aaKnown RBP8.45□□□□□ -1.06
APP-209ENST00000440126 KIF9Q9HAQ2 790 aa8.45□□□□□ -1.06
APP-209ENST00000440126 C1orf112Q9NSG2 853 aa8.45□□□□□ -1.06
APP-209ENST00000440126 CNOT8Q9UFF9 292 aaKnown RBP8.45□□□□□ -1.06
APP-209ENST00000440126 NUB1Q9Y5A7 615 aa8.45□□□□□ -1.06
APP-209ENST00000440126 ATP2A1O14983 1001 aa8.44□□□□□ -1.06
APP-209ENST00000440126 WEE2P0C1S8 567 aa8.44□□□□□ -1.06
APP-209ENST00000440126 TXNP10599 105 aaKnown RBP8.44□□□□□ -1.06
APP-209ENST00000440126 PYGMP11217 842 aa8.44□□□□□ -1.06
APP-209ENST00000440126 PECAM1P16284 738 aaPredicted RBP8.44□□□□□ -1.06
APP-209ENST00000440126 RRM1P23921 792 aa8.44□□□□□ -1.06
APP-209ENST00000440126 EPHX2P34913 555 aa8.44□□□□□ -1.06
APP-209ENST00000440126 TNNC1P63316 161 aa8.44□□□□□ -1.06
APP-209ENST00000440126 TMEM62Q0P6H9 643 aa8.44□□□□□ -1.06
APP-209ENST00000440126 IFI16Q16666 785 aaKnown RBP8.44□□□□□ -1.06
APP-209ENST00000440126 SH3D19Q5HYK7 790 aa8.44□□□□□ -1.06
APP-209ENST00000440126 DPH6Q7L8W6 267 aa8.44□□□□□ -1.06
APP-209ENST00000440126 MAATS1Q7Z4T9 603 aa8.44□□□□□ -1.06
APP-209ENST00000440126 SLFN11Q7Z7L1 901 aa8.44□□□□□ -1.06
APP-209ENST00000440126 IFT20Q8IY31 132 aa8.44□□□□□ -1.06
APP-209ENST00000440126 ZNF564Q8TBZ8 553 aaPredicted RBP8.44□□□□□ -1.06
APP-209ENST00000440126 MMP19Q99542 508 aa8.44□□□□□ -1.06
APP-209ENST00000440126 NTPCRQ9BSD7 190 aaKnown RBP8.44□□□□□ -1.06
APP-209ENST00000440126 RNPEPQ9H4A4 650 aa8.44□□□□□ -1.06
APP-209ENST00000440126 AZI2Q9H6S1 392 aa8.44□□□□□ -1.06
APP-209ENST00000440126 DNAJC17Q9NVM6 304 aaKnown RBP8.44□□□□□ -1.06
APP-209ENST00000440126 CHCHD3Q9NX63 227 aaKnown RBP8.44□□□□□ -1.06
APP-209ENST00000440126 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.44□□□□□ -1.06
APP-209ENST00000440126 PCDHB4Q9Y5E5 795 aa8.44□□□□□ -1.06
APP-209ENST00000440126 NCANO14594 1321 aa8.44□□□□□ -1.06
APP-209ENST00000440126 NFASCO94856 1347 aa8.44□□□□□ -1.06
APP-209ENST00000440126 A0A0G2JLL6 359 aaPredicted RBP8.44□□□□□ -1.06
APP-209ENST00000440126 SMIM23A6NLE4 172 aa8.44□□□□□ -1.06
APP-209ENST00000440126 SETSIPP0DME0 302 aa8.44□□□□□ -1.06
APP-209ENST00000440126 FGFR4P22455 802 aa8.44□□□□□ -1.06
APP-209ENST00000440126 GCKP35557 465 aa8.44□□□□□ -1.06
APP-209ENST00000440126 PSMC4P43686 418 aa8.44□□□□□ -1.06
APP-209ENST00000440126 RAP1GAPP47736 663 aa8.44□□□□□ -1.06
APP-209ENST00000440126 CD151P48509 253 aa8.44□□□□□ -1.06
APP-209ENST00000440126 VPS41P49754 854 aa8.44□□□□□ -1.06
APP-209ENST00000440126 GPC5P78333 572 aa8.44□□□□□ -1.06
APP-209ENST00000440126 TFAMQ00059 246 aaKnown RBP8.44□□□□□ -1.06
APP-209ENST00000440126 SF3A3Q12874 501 aaKnown RBP eCLIP8.44□□□□□ -1.06
APP-209ENST00000440126 KCTD2Q14681 263 aa8.44□□□□□ -1.06
APP-209ENST00000440126 TRIP13Q15645 432 aaPredicted RBP8.44□□□□□ -1.06
APP-209ENST00000440126 BRDTQ58F21 947 aaPredicted RBP8.44□□□□□ -1.06
APP-209ENST00000440126 EEF1DP3Q658K8 133 aa8.44□□□□□ -1.06
APP-209ENST00000440126 XRRA1Q6P2D8 792 aa8.44□□□□□ -1.06
APP-209ENST00000440126 ZNF572Q7Z3I7 529 aaPredicted RBP8.44□□□□□ -1.06
APP-209ENST00000440126 PRRT2Q7Z6L0 340 aaPredicted RBP8.44□□□□□ -1.06
APP-209ENST00000440126 PRUNE1Q86TP1 453 aa8.44□□□□□ -1.06
APP-209ENST00000440126 ERO1BQ86YB8 467 aa8.44□□□□□ -1.06
APP-209ENST00000440126 SCFD2Q8WU76 684 aa8.44□□□□□ -1.06
APP-209ENST00000440126 PSPC1Q8WXF1 523 aaKnown RBP8.44□□□□□ -1.06
APP-209ENST00000440126 ATG4AQ8WYN0 398 aa8.44□□□□□ -1.06
APP-209ENST00000440126 CABS1Q96KC9 395 aa8.44□□□□□ -1.06
APP-209ENST00000440126 MINDY3Q9H8M7 445 aa8.44□□□□□ -1.06
APP-209ENST00000440126 SUCLA2Q9P2R7 463 aaPredicted RBP8.44□□□□□ -1.06
APP-209ENST00000440126 SNX24Q9Y343 169 aa8.44□□□□□ -1.06
APP-209ENST00000440126 CHUKO15111 745 aa8.44□□□□□ -1.06
APP-209ENST00000440126 EXTL3O43909 919 aa8.44□□□□□ -1.06
APP-209ENST00000440126 ARL2P36404 184 aa8.44□□□□□ -1.06
APP-209ENST00000440126 EPHB4P54760 987 aa8.44□□□□□ -1.06
APP-209ENST00000440126 MYBPC2Q14324 1141 aa8.44□□□□□ -1.06
APP-209ENST00000440126 TTMPQ5BVD1 217 aa8.44□□□□□ -1.06
APP-209ENST00000440126 ANKRD13AQ8IZ07 590 aa8.44□□□□□ -1.06
APP-209ENST00000440126 PHC3Q8NDX5 983 aa8.44□□□□□ -1.06
APP-209ENST00000440126 RDM1Q8NG50 284 aa8.44□□□□□ -1.06
APP-209ENST00000440126 LMBR1Q8WVP7 490 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms