RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 DNAJC17Q9NVM6 304 aaKnown RBP12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 AMACRQ9UHK6 382 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 IGLV3-22A0A075B6J6 115 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 A0A1B0GUA9 196 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 GRID2IPA4D2P6 1211 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 ADORA2AP29274 412 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 SESN3P58005 492 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 TMEM132DQ14C87 1099 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 GNASQ5JWF2 1037 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 FBXW10Q5XX13 1052 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 CTAGE3PQ8IX95 158 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 TRAPPC12Q8WVT3 735 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 HOMER3Q9NSC5 361 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 PCSK1NQ9UHG2 260 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 SNX9Q9Y5X1 595 aa12.3□□□□□ -0.44
TRAPPC9-202ENST00000438773 FZD9O00144 591 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 LPXNO60711 386 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 ALDH1A1P00352 501 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 SLC26A2P50443 739 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 CYP24A1Q07973 514 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 CYP4F22Q6NT55 531 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 CCNI2Q6ZMN8 369 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 PALM2Q8IXS6 379 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 NME8Q8N427 588 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 TMC2Q8TDI7 906 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 WNT8AQ9H1J5 351 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 BTAF1O14981 1849 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 UBR2Q8IWV8 1755 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 H3BRB1 525 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 NDC80O14777 642 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 PEX10O60683 326 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 CTSHP09668 335 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 CUL1Q13616 776 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 PPP2R5DQ14738 602 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 SIX6OS1Q8N1H7 587 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 MSL3Q8N5Y2 521 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 INPP4AQ96PE3 977 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 SENP7Q9BQF6 1050 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 TMEM117Q9H0C3 514 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 THAP2Q9H0W7 228 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 KCTD10Q9H3F6 313 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 TUT1Q9H6E5 874 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 AIPL1Q9NZN9 384 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 UVRAGQ9P2Y5 699 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 ANAPC5Q9UJX4 755 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 ASTN1O14525 1302 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 A8MXQ7 604 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 SART1O43290 800 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 USP2O75604 605 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 SGPL1O95470 568 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 INSRRP14616 1297 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 IRAK1P51617 712 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 MEA1Q16626 185 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 UGCGQ16739 394 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 KYAT1Q16773 422 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 CCDC14Q49A88 953 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 PAPD7Q5XG87 772 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 DLK2Q6UY11 383 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 MMS22LQ6ZRQ5 1243 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 KAT2BQ92831 832 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 CALR3Q96L12 384 aaKnown RBP12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 IFT122Q9HBG6 1241 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 ALG6Q9Y672 507 aa12.29□□□□□ -0.44
TRAPPC9-202ENST00000438773 STRNO43815 780 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 MYBL1P10243 752 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 RBP5P82980 135 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 CBWD6Q4V339 395 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 CBWD3Q5JTY5 395 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 CBWD5Q5RIA9 395 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 EP400NLQ6ZTU2 488 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 TADA2BQ86TJ2 420 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 CACNA2D3Q8IZS8 1091 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 CLEC4DQ8WXI8 215 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 HSPH1Q92598 858 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 LBHD1Q9BQE6 289 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 NIF3L1Q9GZT8 377 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 IKZF4Q9H2S9 585 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 VIPAS39Q9H9C1 493 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 IRS2Q9Y4H2 1338 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 RASSF10A6NK89 507 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 MCF2LO15068 1137 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 VTNP04004 478 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 GCKP35557 465 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 LAMTOR4Q0VGL1 99 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 ZNF484Q5JVG2 852 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 RHOT1Q8IXI2 618 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 PARD3BQ8TEW8 1205 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 MTMR12Q9C0I1 747 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 RBM12Q9NTZ6 932 aaKnown RBP12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 PODXLO00592 558 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 ZNF263O14978 683 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 RARBP10826 455 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 CDC42EP1Q00587 391 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 KIZQ2M2Z5 673 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 COBLL1Q53SF7 1204 aa12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 FAM133BQ5BKY9 247 aaKnown RBP12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 PPP6R3Q5H9R7 873 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 FAM102AQ5T9C2 384 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC9-202ENST00000438773 LBX2Q6XYB7 198 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms