RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CCDC91Q7Z6B0 441 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 MREGQ8N565 214 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 BTBD6Q96KE9 485 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 SMARCAD1Q9H4L7 1026 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 ERVK-5Q9HDB9 667 aa14.87□□□□□ -0.03
PTCHD3-201ENST00000438700 ABCD1P33897 745 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 LIG4P49917 911 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 MFAP3P55082 362 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 GPC5P78333 572 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 CUL1Q13616 776 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 MESDQ14696 234 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 RNF187Q5TA31 235 aaPredicted RBP14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 LMBRD2Q68DH5 695 aaPredicted RBP14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 SAPCD2Q86UD0 394 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 TRAPPC12Q8WVT3 735 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 FAM213AQ9BRX8 229 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 CARD9Q9H257 536 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 CXorf56Q9H5V9 222 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 TMEM8AQ9HCN3 771 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 PLAAQ9Y263 795 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 ADGRA2Q96PE1 1338 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 RBM47A0AV96 593 aaKnown RBP14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 GH1P01241 217 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 HPDP32754 393 aaPredicted RBP14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 LAMC2Q13753 1193 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 TAF1CQ15572 869 aaPredicted RBP14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 SV2AQ7L0J3 742 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 CPNE8Q86YQ8 564 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 LRRC71Q8N4P6 559 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 FBXL13Q8NEE6 735 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 OR2W6PQ8NHA6 318 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 CCDC26Q8TAB7 109 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 NPLOC4Q8TAT6 608 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 HELQQ8TDG4 1101 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 ZNF473Q8WTR7 871 aaKnown RBP14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 PRPF31Q8WWY3 499 aaKnown RBP14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 SHC3Q92529 594 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 TATDN2Q93075 761 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 CENPHQ9H3R5 247 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 SLITRK6Q9H5Y7 841 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 PPME1Q9Y570 386 aa14.86□□□□□ -0.03
PTCHD3-201ENST00000438700 MANSC4A6NHS7 340 aaPredicted RBP14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 K7ERI5 159 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 RTN2O75298 545 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 CYP11B1P15538 503 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 GARTP22102 1010 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 SLC26A2P50443 739 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 FMO1Q01740 532 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 CYP24A1Q07973 514 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 IFT88Q13099 833 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 MKRN4PQ13434 485 aaPredicted RBP14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 SPRED3Q2MJR0 410 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 RGMBQ6NW40 437 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 FBXL18Q96ME1 805 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 NT5C1BQ96P26 610 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 RAB20Q9NX57 234 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 ZNF236Q9UL36 1845 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 SLC15A5A6NIM6 579 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 KIAA0754O94854 1291 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 KRT5P13647 590 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 COMTP21964 271 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 MAP2K2P36507 400 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 HSD17B3P37058 310 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 HSPA9P38646 679 aaKnown RBP14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 CEP85LQ5SZL2 805 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 GPD1LQ8N335 351 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 AFG1LQ8WV93 481 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 CCT8L2Q96SF2 557 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 TINF2Q9BSI4 451 aa14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 PPANQ9NQ55 473 aaKnown RBP14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 UTP11Q9Y3A2 253 aaKnown RBP14.85□□□□□ -0.03
PTCHD3-201ENST00000438700 LGALS2P05162 132 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 NR1D1P20393 614 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 PDE6CP51160 858 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 GPC3P51654 580 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 IER5Q5VY09 327 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 PPTC7Q8NI37 304 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 KCNN1Q92952 543 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 VTI1AQ96AJ9 217 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 ZBTB10Q96DT7 871 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 EPN3Q9H201 632 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 RNPEPQ9H4A4 650 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 ERAP1Q9NZ08 941 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 TTC7AQ9ULT0 858 aaPredicted RBP14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 EVPLQ92817 2033 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 IGKV6-21A0A0C4DH24 114 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 PMM2O15305 246 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 ADCY3O60266 1144 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 HBP1O60381 514 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 EDN1P05305 212 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 SCP2P22307 547 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 PTENP60484 403 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 UAP1Q16222 522 aaPredicted RBP14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 PTGISQ16647 500 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 KDM7AQ6ZMT4 941 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 B4GALNT4Q76KP1 1039 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 UBLCP1Q8WVY7 318 aaPredicted RBP14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 TCP11Q8WWU5 503 aa14.84□□□□□ -0.03
PTCHD3-201ENST00000438700 PSPC1Q8WXF1 523 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms