RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 TMF1P82094 1093 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 HMGN5P82970 282 aaKnown RBP4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 GRIN1Q05586 938 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 DPTQ07507 201 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 KCNAB2Q13303 367 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 BLMHQ13867 455 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 ISM2Q6H9L7 571 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 GALNT17Q6IS24 598 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 Q6ZUG5 572 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 GALNT13Q8IUC8 556 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 TRIM59Q8IWR1 403 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 RTKN2Q8IZC4 609 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 ESX1Q8N693 406 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 MSANTD4Q8NCY6 345 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 NPLOC4Q8TAT6 608 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 MGARPQ8TDB4 240 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 BTN2A2Q8WVV5 523 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 STON2Q8WXE9 905 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 RSAD2Q8WXG1 361 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 OSBP2Q969R2 916 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 JAKMIP2Q96AA8 810 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 FERMT2Q96AC1 680 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 AHCYL2Q96HN2 611 aaKnown RBP4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 MPHOSPH8Q99549 860 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 ORAI3Q9BRQ5 295 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 ADPGKQ9BRR6 497 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 DESI2Q9BSY9 194 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 STK31Q9BXU1 1019 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 GTPBP4Q9BZE4 634 aaKnown RBP4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 VPS33BQ9H267 617 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 BHMT2Q9H2M3 363 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 FAM204AQ9H8W3 233 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 CYP4F11Q9HBI6 524 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 DIAPH3Q9NSV4 1193 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 ABCF3Q9NUQ8 709 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 NSMCE4AQ9NXX6 385 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 A6NLC8 198 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 AGRPO00253 132 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 IPO8O15397 1037 aaKnown RBP4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 NARSO43776 548 aaKnown RBP4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 OFD1O75665 1012 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 DGKIO75912 1065 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 FKBP9O95302 570 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 SLC4A1P02730 911 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 CAPNS1P04632 268 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 POLBP06746 335 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 VEGFAP15692 232 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 ACO1P21399 889 aaKnown RBP4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 AKAP5P24588 427 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 ATP6V1E1P36543 226 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 CD86P42081 329 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 LIFRP42702 1097 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 NPTX2P47972 431 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 PDE6CP51160 858 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 PPP2R2AP63151 447 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 LSAMPQ13449 338 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 SPARCL1Q14515 664 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 HSP90AA2PQ14568 343 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 SMAD2Q15796 467 aaKnown RBP4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 KIAA0753Q2KHM9 967 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 ATAT1Q5SQI0 421 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 FKBP15Q5T1M5 1219 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 MFSD4BQ5TF39 518 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 AGBL4Q5VU57 503 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 E4F1Q66K89 784 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 KLHL10Q6JEL2 608 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 TATDN1Q6P1N9 297 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 PGM2L1Q6PCE3 622 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 C16orf87Q6PH81 154 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 DSTYKQ6XUX3 929 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 MFSD6Q6ZSS7 791 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 FKBP9P1Q75LS8 142 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 SDCCAG8Q86SQ7 713 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 C1orf210Q8IVY1 113 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 CCDC103Q8IW40 242 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 FUKQ8N0W3 1084 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 KRT78Q8N1N4 520 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 NXPE1Q8N323 547 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 SMC1BQ8NDV3 1235 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 PPP1R35Q8TAP8 253 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 ASB12Q8WXK4 309 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 ZG16BQ96DA0 208 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 PLEKHG4BQ96PX9 1271 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 TREX2Q9BQ50 279 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 KIAA1683Q9H0B3 1180 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 NKX2-4Q9H2Z4 354 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 WASH6PQ9NQA3 447 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 MKS1Q9NXB0 559 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 WDR35Q9P2L0 1181 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 LRP2BPQ9P2M1 347 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 GTF3C4Q9UKN8 822 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 BLOC1S6Q9UL45 172 aa4.1□□□□□ -1.75
HMGB1P12-201ENST00000438594 C17orf113A0A1B0GUU1 675 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 TCRBV16S1A1N1A0A5B0 115 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 ERICH4A6NGS2 130 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 B4DLN1 442 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 H7BY64 318 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 H7C0S8 307 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 PRODHO43272 600 aa4.09□□□□□ -1.75
HMGB1P12-201ENST00000438594 XPOTO43592 962 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms