RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ADI1Q9BV57 179 aa4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 IFT22Q9H7X7 185 aa4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 ARPP21Q9UBL0 812 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 MAPRE3Q9UPY8 281 aa4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 APOBEC2Q9Y235 224 aaKnown RBP4.57□□□□□ -1.68
HMGB1P31-201ENST00000437242 NEMP1O14524 444 aa4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 ENDOD1O94919 500 aa4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 MYCLP1P12525 358 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 FPR1P21462 350 aa4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 ZNF81P51508 661 aa4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 PROK1P58294 105 aa4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 ZNF788Q6ZQV5 615 aa4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 SH2D3CQ8N5H7 860 aa4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 TGFBRAP1Q8WUH2 860 aa4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 ANKS1AQ92625 1134 aa4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 HOXB13Q92826 284 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 MARS2Q96GW9 593 aaKnown RBP4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 MED15Q96RN5 788 aa4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 PNKPQ96T60 521 aa4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 TTC1Q99614 292 aa4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 DMRT3Q9NQL9 472 aa4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 SCOCQ9UIL1 159 aa4.56□□□□□ -1.68
HMGB1P31-201ENST00000437242 A0A087X0B3 334 aa4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 ZEB2O60315 1214 aa4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 GPD1P21695 349 aa4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 FOLR3P41439 243 aa4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 ID4P47928 161 aa4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 NOMO1Q15155 1222 aa4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 SF3B3Q15393 1217 aaKnown RBP4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 PTF1AQ7RTS3 328 aa4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 FITM2Q8N6M3 262 aa4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 NUP133Q8WUM0 1156 aa4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 DRC1Q96MC2 740 aa4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 MYOCQ99972 504 aa4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 CPNE5Q9HCH3 593 aa4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 SLC23A1Q9UHI7 598 aa4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 RUVBL1Q9Y265 456 aaKnown RBP4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 ACTL7AQ9Y615 435 aa4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 MRPL42Q9Y6G3 142 aaKnown RBP4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 COL3A1P02461 1466 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P31-201ENST00000437242 CCDC151A5D8V7 595 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 CDHR4A6H8M9 788 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 CGB1A6NKQ9 187 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 GOLGA8AA7E2F4 631 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 PROB1E7EW31 1015 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 GPR32O75388 356 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 ZFPL1O95159 310 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 NOMO3P69849 1222 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 PPP3CAQ08209 521 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 MALLQ13021 153 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 ANO4Q32M45 955 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 NOMO2Q5JPE7 1267 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 TOR2AQ5JU69 321 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 KIAA0907Q7Z7F0 614 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 SARAFQ96BY9 339 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 C1QTNF7Q9BXJ2 289 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 HSFX1Q9UBD0 423 aa4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 SETD1BQ9UPS6 1966 aaKnown RBP4.54□□□□□ -1.68
HMGB1P31-201ENST00000437242 YY2O15391 372 aa4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 PCSK1P29120 753 aa4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 MCAMP43121 646 aa4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 KRTAP10-9P60411 292 aa4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 DDX46Q7L014 1031 aaKnown RBP4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 C1QL2Q7Z5L3 287 aa4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 PEG10Q86TG7 708 aaKnown RBP4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 TBC1D15Q8TC07 691 aa4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 TMEM125Q96AQ2 219 aa4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 CYFIP2Q96F07 1278 aa4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 FBXL20Q96IG2 436 aa4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 ZNF778Q96MU6 729 aa4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 TIMP4Q99727 224 aa4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 ZNF70Q9UC06 446 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 ENTPD2Q9Y5L3 495 aa4.53□□□□□ -1.68
HMGB1P31-201ENST00000437242 FAM171A2A8MVW0 826 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 KIAA0391O15091 583 aaKnown RBP4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 MAPK10P53779 464 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 SRSF2Q01130 221 aaKnown RBP4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 CREMQ03060 361 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 SLFN5Q08AF3 891 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 MGAT2Q10469 447 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 STRN3Q13033 797 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 ATP2B3Q16720 1220 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 NBPF8Q3BBV2 869 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 TAF7LQ5H9L4 462 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 TSTD2Q5T7W7 516 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 KAZNQ674X7 775 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 VWA1Q6PCB0 445 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 KCNK18Q7Z418 384 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 CMIPQ8IY22 773 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 CCHCR1Q8TD31 782 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 LMBR1Q8WVP7 490 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 GSTO2Q9H4Y5 243 aa4.52□□□□□ -1.69
HMGB1P31-201ENST00000437242 TCRBV7S2A1N4TA0A589 114 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 MANSC4A6NHS7 340 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 MPPED1O15442 326 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 SRGNP10124 158 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 FCER1AP12319 257 aa4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 GSPT1P15170 499 aaKnown RBP4.51□□□□□ -1.69
HMGB1P31-201ENST00000437242 WT1P19544 449 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms