RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 BACE2Q9Y5Z0 518 aa16.32■□□□□ 0.2
HDAC8-213ENST00000436675 PIAS3Q9Y6X2 628 aa16.32■□□□□ 0.2
HDAC8-213ENST00000436675 CEP295Q9C0D2 2601 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 WDR27A2RRH5 827 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 CHURC1-FNTBB4DL54 471 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 SEC24AO95486 1093 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 GJA1P17302 382 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 KRT2P35908 639 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 VIPR2P41587 438 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 CCR2P41597 374 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 FNTBP49356 437 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 DMWDQ09019 674 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 SIM2Q14190 667 aaPredicted RBP16.31■□□□□ 0.2
HDAC8-213ENST00000436675 PPP2R5DQ14738 602 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 PRSS36Q5K4E3 855 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 RTL10Q7L3V2 364 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 CELF5Q8N6W0 485 aaKnown RBP16.31■□□□□ 0.2
HDAC8-213ENST00000436675 MCPH1Q8NEM0 835 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 DEPTORQ8TB45 409 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 NETO1Q8TDF5 533 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 ZSWIM3Q96MP5 696 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 PPP1R10Q96QC0 940 aaKnown RBP16.31■□□□□ 0.2
HDAC8-213ENST00000436675 KIFC3Q9BVG8 833 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 C2orf40Q9H1Z8 148 aa16.31■□□□□ 0.2
HDAC8-213ENST00000436675 ZNF334Q9HCZ1 680 aaPredicted RBP16.31■□□□□ 0.2
HDAC8-213ENST00000436675 AVENQ9NQS1 362 aaPredicted RBP16.31■□□□□ 0.2
HDAC8-213ENST00000436675 ORC3Q9UBD5 711 aaPredicted RBP16.31■□□□□ 0.2
HDAC8-213ENST00000436675 STK36Q9NRP7 1315 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 ARHGEF37A1IGU5 675 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 TMEM189-UBE2V1I3L0A0 370 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 ACKR2O00590 384 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 SLC30A4O14863 429 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 TRAPPC3O43617 180 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 GDF9O60383 454 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 RETP07949 1114 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 SPATA31C1P0DKV0 1188 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 CCR3P51677 355 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 SOX4Q06945 474 aaPredicted RBP16.3■□□□□ 0.2
HDAC8-213ENST00000436675 UPP1Q16831 310 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 HEATR6Q6AI08 1181 aaKnown RBP16.3■□□□□ 0.2
HDAC8-213ENST00000436675 VITQ6UXI7 678 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 PDZD4Q76G19 769 aaPredicted RBP16.3■□□□□ 0.2
HDAC8-213ENST00000436675 ZNF461Q8TAF7 563 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 IRF7Q92985 503 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 ASB16Q96NS5 453 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 CCDC113Q9H0I3 377 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 SEMA4GQ9NTN9 838 aa16.3■□□□□ 0.2
HDAC8-213ENST00000436675 ZFHX4Q86UP3 3567 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 ZNF197O14709 1029 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 HRO43593 1189 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 NEMFO60524 1076 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 MED24O75448 989 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 ABLIM3O94929 683 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 MYL4P12829 197 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 XRCC6P12956 609 aaKnown RBP eCLIP16.29■□□□□ 0.2
HDAC8-213ENST00000436675 CCNE1P24864 410 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 CXCL12P48061 93 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 RBM25P49756 843 aaKnown RBP16.29■□□□□ 0.2
HDAC8-213ENST00000436675 OSTNP61366 133 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 GAS6Q14393 721 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 DCAF4L1Q3SXM0 396 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 CYP4A22Q5TCH4 519 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 NT5DC1Q5TFE4 455 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 PRR23CQ6ZRP0 262 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.29■□□□□ 0.2
HDAC8-213ENST00000436675 CATSPER3Q86XQ3 398 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 GPIHBP1Q8IV16 184 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 MAP4K3Q8IVH8 894 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 TNFRSF25Q93038 417 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 RBM12Q9NTZ6 932 aaKnown RBP16.29■□□□□ 0.2
HDAC8-213ENST00000436675 INSL5Q9Y5Q6 135 aa16.29■□□□□ 0.2
HDAC8-213ENST00000436675 CITO14578 2027 aa16.28■□□□□ 0.2
HDAC8-213ENST00000436675 CTDNEP1O95476 244 aa16.28■□□□□ 0.2
HDAC8-213ENST00000436675 PSMC3P17980 439 aa16.28■□□□□ 0.2
HDAC8-213ENST00000436675 HOXC13P31276 330 aa16.28■□□□□ 0.2
HDAC8-213ENST00000436675 ATF7IP2Q5U623 682 aa16.28■□□□□ 0.2
HDAC8-213ENST00000436675 SLC8B1Q6J4K2 584 aa16.28■□□□□ 0.2
HDAC8-213ENST00000436675 PADI6Q6TGC4 694 aa16.28■□□□□ 0.2
HDAC8-213ENST00000436675 CEP120Q8N960 986 aa16.28■□□□□ 0.2
HDAC8-213ENST00000436675 SMARCD2Q92925 531 aa16.28■□□□□ 0.2
HDAC8-213ENST00000436675 UROC1Q96N76 676 aa16.28■□□□□ 0.2
HDAC8-213ENST00000436675 MTMR9Q96QG7 549 aa16.28■□□□□ 0.2
HDAC8-213ENST00000436675 TMEM60Q9H2L4 133 aa16.28■□□□□ 0.2
HDAC8-213ENST00000436675 BRMS1Q9HCU9 246 aa16.28■□□□□ 0.2
HDAC8-213ENST00000436675 RALYQ9UKM9 306 aaKnown RBP16.28■□□□□ 0.2
HDAC8-213ENST00000436675 NCANO14594 1321 aa16.27■□□□□ 0.2
HDAC8-213ENST00000436675 SMIM28A0A1B0GU29 152 aa16.27■□□□□ 0.2
HDAC8-213ENST00000436675 ARHGEF35A5YM69 484 aa16.27■□□□□ 0.2
HDAC8-213ENST00000436675 BTBD18B2RXH4 712 aa16.27■□□□□ 0.2
HDAC8-213ENST00000436675 PODXLO00592 558 aa16.27■□□□□ 0.2
HDAC8-213ENST00000436675 ZNF263O14978 683 aa16.27■□□□□ 0.2
HDAC8-213ENST00000436675 CHRNB1P11230 501 aa16.27■□□□□ 0.2
HDAC8-213ENST00000436675 ATF2P15336 505 aa16.27■□□□□ 0.2
HDAC8-213ENST00000436675 NAMPTP43490 491 aa16.27■□□□□ 0.2
HDAC8-213ENST00000436675 SOX9P48436 509 aa16.27■□□□□ 0.2
HDAC8-213ENST00000436675 TCEAL8Q8IYN2 117 aa16.27■□□□□ 0.2
HDAC8-213ENST00000436675 ELMOD1Q8N336 334 aa16.27■□□□□ 0.2
HDAC8-213ENST00000436675 TTC8Q8TAM2 541 aa16.27■□□□□ 0.2
HDAC8-213ENST00000436675 ZSCAN18Q8TBC5 510 aaPredicted RBP16.27■□□□□ 0.2
HDAC8-213ENST00000436675 ZNF512Q96ME7 567 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms