RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 ZC3H11AO75152 810 aaKnown RBP eCLIP18.15■□□□□ 0.5
CALD1-209ENST00000436461 LRRN2O75325 713 aa18.15■□□□□ 0.5
CALD1-209ENST00000436461 PBX2P40425 430 aa18.15■□□□□ 0.5
CALD1-209ENST00000436461 CLDN10P78369 228 aa18.15■□□□□ 0.5
CALD1-209ENST00000436461 MIIPQ5JXC2 388 aa18.15■□□□□ 0.5
CALD1-209ENST00000436461 SV2AQ7L0J3 742 aa18.15■□□□□ 0.5
CALD1-209ENST00000436461 APTXQ7Z2E3 356 aaKnown RBP18.15■□□□□ 0.5
CALD1-209ENST00000436461 LRRC43Q8N309 656 aa18.15■□□□□ 0.5
CALD1-209ENST00000436461 C1orf127Q8N9H9 656 aa18.15■□□□□ 0.5
CALD1-209ENST00000436461 ANKRD36BP1Q96IX9 119 aa18.15■□□□□ 0.5
CALD1-209ENST00000436461 PRO3102Q9H379 93 aa18.15■□□□□ 0.5
CALD1-209ENST00000436461 DPP3Q9NY33 737 aa18.15■□□□□ 0.5
CALD1-209ENST00000436461 UBQLN1Q9UMX0 589 aaKnown RBP18.15■□□□□ 0.5
CALD1-209ENST00000436461 MRPL42Q9Y6G3 142 aaKnown RBP18.15■□□□□ 0.5
CALD1-209ENST00000436461 ARHGEF15O94989 841 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 C4BPAP04003 597 aaKnown RBP18.14■□□□□ 0.49
CALD1-209ENST00000436461 ITGB3P05106 788 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 CLCNKBP51801 687 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 TPM4P67936 248 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 BIRC3Q13489 604 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 MAN2A1Q16706 1144 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 PTPN21Q16825 1174 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 DUOXA2Q1HG44 320 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 TRAPPC11Q7Z392 1133 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 SPRED2Q7Z698 418 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 FAM193BQ96PV7 902 aaPredicted RBP18.14■□□□□ 0.49
CALD1-209ENST00000436461 CWH43Q9H720 699 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 KANSL3Q9P2N6 904 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 LIMA1Q9UHB6 759 aaKnown RBP18.14■□□□□ 0.49
CALD1-209ENST00000436461 DERAQ9Y315 318 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 INSL6Q9Y581 213 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 NLRC5Q86WI3 1866 aa18.14■□□□□ 0.49
CALD1-209ENST00000436461 NT5C1B-RDH14C9J2C7 533 aa18.13■□□□□ 0.49
CALD1-209ENST00000436461 CST3P01034 146 aaPredicted RBP18.13■□□□□ 0.49
CALD1-209ENST00000436461 TNNC2P02585 160 aa18.13■□□□□ 0.49
CALD1-209ENST00000436461 AFPP02771 609 aaKnown RBP18.13■□□□□ 0.49
CALD1-209ENST00000436461 KRT19P08727 400 aa18.13■□□□□ 0.49
CALD1-209ENST00000436461 FMO5P49326 533 aa18.13■□□□□ 0.49
CALD1-209ENST00000436461 COPB1P53618 953 aaKnown RBP18.13■□□□□ 0.49
CALD1-209ENST00000436461 DSC1Q08554 894 aa18.13■□□□□ 0.49
CALD1-209ENST00000436461 TUSC3Q13454 348 aa18.13■□□□□ 0.49
CALD1-209ENST00000436461 VWA3BQ502W6 1294 aa18.13■□□□□ 0.49
CALD1-209ENST00000436461 SPOUT1Q5T280 376 aaKnown RBP18.13■□□□□ 0.49
CALD1-209ENST00000436461 USP37Q86T82 979 aa18.13■□□□□ 0.49
CALD1-209ENST00000436461 COLGALT2Q8IYK4 626 aa18.13■□□□□ 0.49
CALD1-209ENST00000436461 CMTR2Q8IYT2 770 aaKnown RBP18.13■□□□□ 0.49
CALD1-209ENST00000436461 BEST2Q8NFU1 509 aa18.13■□□□□ 0.49
CALD1-209ENST00000436461 HASPINQ8TF76 798 aa18.13■□□□□ 0.49
CALD1-209ENST00000436461 RAD9AQ99638 391 aa18.13■□□□□ 0.49
CALD1-209ENST00000436461 MRPL9Q9BYD2 267 aaKnown RBP18.13■□□□□ 0.49
CALD1-209ENST00000436461 SIX4Q9UIU6 781 aa18.13■□□□□ 0.49
CALD1-209ENST00000436461 VNN1O95497 513 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 POLR2BP30876 1174 aaKnown RBP18.12■□□□□ 0.49
CALD1-209ENST00000436461 OR1G1P47890 313 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 MXI1P50539 228 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 MCCD1P59942 119 aaPredicted RBP18.12■□□□□ 0.49
CALD1-209ENST00000436461 PLCB2Q00722 1185 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 ZACNQ401N2 412 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 C15orf39Q6ZRI6 1047 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 NT5DC4Q86YG4 428 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 TAS1R2Q8TE23 839 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 CACTINQ8WUQ7 758 aaKnown RBP18.12■□□□□ 0.49
CALD1-209ENST00000436461 NDST4Q9H3R1 872 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 TMEM8AQ9HCN3 771 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 SLC38A7Q9NVC3 462 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 CHD7Q9P2D1 2997 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 YBX2Q9Y2T7 364 aaKnown RBP18.12■□□□□ 0.49
CALD1-209ENST00000436461 PRG3Q9Y2Y8 225 aaPredicted RBP18.12■□□□□ 0.49
CALD1-209ENST00000436461 PHACTR2O75167 634 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 SERPINC1P01008 464 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 FANCCQ00597 558 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 MYL7Q01449 175 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 KRT39Q6A163 491 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 TMEM173Q86WV6 379 aaPredicted RBP18.12■□□□□ 0.49
CALD1-209ENST00000436461 C3orf58Q8NDZ4 430 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 CXorf38Q8TB03 319 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 NAP1L5Q96NT1 182 aaPredicted RBP18.12■□□□□ 0.49
CALD1-209ENST00000436461 CRACR2AQ9BSW2 395 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 PI4K2AQ9BTU6 479 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 AGAP1Q9UPQ3 857 aa18.12■□□□□ 0.49
CALD1-209ENST00000436461 PODXLO00592 558 aa18.11■□□□□ 0.49
CALD1-209ENST00000436461 AP5Z1O43299 807 aa18.11■□□□□ 0.49
CALD1-209ENST00000436461 XPOTO43592 962 aaKnown RBP18.11■□□□□ 0.49
CALD1-209ENST00000436461 ITGB1P05556 798 aa18.11■□□□□ 0.49
CALD1-209ENST00000436461 CA3P07451 260 aa18.11■□□□□ 0.49
CALD1-209ENST00000436461 SLC11A1P49279 550 aa18.11■□□□□ 0.49
CALD1-209ENST00000436461 ENPEPQ07075 957 aa18.11■□□□□ 0.49
CALD1-209ENST00000436461 C9orf57Q5W0N0 161 aa18.11■□□□□ 0.49
CALD1-209ENST00000436461 FIBCD1Q8N539 461 aa18.11■□□□□ 0.49
CALD1-209ENST00000436461 ANKRD20A12PQ8NF67 263 aa18.11■□□□□ 0.49
CALD1-209ENST00000436461 SEMA4DQ92854 862 aa18.11■□□□□ 0.49
CALD1-209ENST00000436461 PBX4Q9BYU1 374 aa18.11■□□□□ 0.49
CALD1-209ENST00000436461 COLQQ9Y215 455 aaPredicted RBP18.11■□□□□ 0.49
CALD1-209ENST00000436461 CHD9Q3L8U1 2897 aa18.1■□□□□ 0.49
CALD1-209ENST00000436461 NRP1O14786 923 aa18.1■□□□□ 0.49
CALD1-209ENST00000436461 TEX33O43247 280 aa18.1■□□□□ 0.49
CALD1-209ENST00000436461 CLSTN1O94985 981 aa18.1■□□□□ 0.49
CALD1-209ENST00000436461 KIF4AO95239 1232 aa18.1■□□□□ 0.49
CALD1-209ENST00000436461 HLA-DRAP01903 254 aa18.1■□□□□ 0.49
CALD1-209ENST00000436461 GALTP07902 379 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms