RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 URGCPQ8TCY9 931 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 NOC3LQ8WTT2 800 aaKnown RBP11.93□□□□□ -0.5
HMGCL-204ENST00000436439 SPIRE2Q8WWL2 714 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 HVCN1Q96D96 273 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 KLHL5Q96PQ7 755 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 FGFBP2Q9BYJ0 223 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 KCTD10Q9H3F6 313 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 MARCH5Q9NX47 278 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.93□□□□□ -0.5
HMGCL-204ENST00000436439 MAPK8IP1Q9UQF2 711 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 NR2E1Q9Y466 385 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 IPPQ9Y573 584 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 PCDHB13Q9Y5F0 798 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 CNTNAP2Q9UHC6 1331 aa11.93□□□□□ -0.5
HMGCL-204ENST00000436439 F8W810 466 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 H0YCG3 227 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 ERLIN2O94905 339 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 GCNT3O95395 438 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 ASGR2P07307 311 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 CNPP09543 421 aaKnown RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 ARL2P36404 184 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 MLH1P40692 756 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 MTHFRP42898 656 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 CLCN4P51793 760 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 PMS1P54277 932 aaKnown RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 GTF2BQ00403 316 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 MBTD1Q05BQ5 628 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 DMP1Q13316 513 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 BMS1Q14692 1282 aaKnown RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 KNOP1Q1ED39 458 aaKnown RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 EDRF1Q3B7T1 1238 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 CDKAL1Q5VV42 579 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 TMC5Q6UXY8 1006 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 TAS1R1Q7RTX1 841 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 ZBTB33Q86T24 672 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 CDR2LQ86X02 465 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 IFNLR1Q8IU57 520 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 COLGALT2Q8IYK4 626 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 GLIS3Q8NEA6 775 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 TMEM174Q8WUU8 243 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 NECTIN4Q96NY8 510 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 DUSP9Q99956 384 aaKnown RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 TMEM175Q9BSA9 504 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 THAP9Q9H5L6 903 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 DZANK1Q9NVP4 752 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 FANCLQ9NW38 375 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 TBC1D7Q9P0N9 293 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 TRAF3IP3Q9Y228 551 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 FAN1Q9Y2M0 1017 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 PRG3Q9Y2Y8 225 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 CARNS1A5YM72 827 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 INO80B-WBP1J3KQ70 363 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 PDXKO00764 312 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 C2CD2LO14523 706 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 B4GALT5O43286 388 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 FGFR1OPO95684 399 aaKnown RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 EFEMP2O95967 443 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 ALDH2P05091 517 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 MYBP10242 640 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 ITGA4P13612 1032 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 ARF4P18085 180 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 GLRA2P23416 452 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 NMT1P30419 496 aaKnown RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 AVPR2P30518 371 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 AXLP30530 894 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 HOXD13P35453 343 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 NAMPTP43490 491 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 NPTX2P47972 431 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 SCNN1GP51170 649 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 SMTNP53814 917 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 STX17P56962 302 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 MXD4Q14582 209 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 PPP2R5AQ15172 486 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 NFIL3Q16649 462 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 ANKRD40Q6AI12 368 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 NOTUMQ6P988 496 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 ZC3H3Q8IXZ2 948 aaKnown RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 RNF168Q8IYW5 571 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 MRFAP1L1Q96HT8 127 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 IFT74Q96LB3 600 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 RIPOR3Q96MK2 946 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 ZFP42Q96MM3 310 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 FAM193BQ96PV7 902 aaPredicted RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 GAD1Q99259 594 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 TSG101Q99816 390 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 TRIM5Q9C035 493 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 NXF3Q9H4D5 531 aaKnown RBP11.92□□□□□ -0.5
HMGCL-204ENST00000436439 GPRC5CQ9NQ84 441 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 KANSL3Q9P2N6 904 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 SORCS3Q9UPU3 1222 aa11.92□□□□□ -0.5
HMGCL-204ENST00000436439 TRIP11Q15643 1979 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 TRIM49BA6NDI0 452 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 ARL5CA6NH57 179 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 K7ENM7 598 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 INPPL1O15357 1258 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 SOD2P04179 222 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 KLRC2P26717 231 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 OR1G1P47890 313 aa11.91□□□□□ -0.5
HMGCL-204ENST00000436439 PEX3P56589 373 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms