RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 LEXMQ3ZCV2 418 aa22.78■■□□□ 1.24
GTF3A-203ENST00000435781 KIAA0319Q5VV43 1072 aa22.78■■□□□ 1.24
GTF3A-203ENST00000435781 KANK3Q6NY19 840 aa22.78■■□□□ 1.24
GTF3A-203ENST00000435781 TMEM130Q8N3G9 435 aa22.78■■□□□ 1.24
GTF3A-203ENST00000435781 TMEM87AQ8NBN3 555 aa22.78■■□□□ 1.24
GTF3A-203ENST00000435781 PCIF1Q9H4Z3 704 aa22.78■■□□□ 1.24
GTF3A-203ENST00000435781 UBQLN1Q9UMX0 589 aaKnown RBP22.78■■□□□ 1.24
GTF3A-203ENST00000435781 GOLGA8IPA6NC78 632 aa22.77■■□□□ 1.24
GTF3A-203ENST00000435781 GOLGA8JA6NMD2 632 aa22.77■■□□□ 1.24
GTF3A-203ENST00000435781 TGFB1I1O43294 461 aa22.77■■□□□ 1.24
GTF3A-203ENST00000435781 ELAVL2Q12926 359 aaKnown RBP22.77■■□□□ 1.24
GTF3A-203ENST00000435781 TJAP1Q5JTD0 557 aa22.77■■□□□ 1.24
GTF3A-203ENST00000435781 FAM171A1Q5VUB5 890 aa22.77■■□□□ 1.24
GTF3A-203ENST00000435781 JADE1Q6IE81 842 aa22.77■■□□□ 1.24
GTF3A-203ENST00000435781 KIAA1841Q6NSI8 718 aa22.77■■□□□ 1.24
GTF3A-203ENST00000435781 CCDC34Q96HJ3 373 aa22.77■■□□□ 1.24
GTF3A-203ENST00000435781 ASB7Q9H672 318 aa22.77■■□□□ 1.24
GTF3A-203ENST00000435781 CLEC1BQ9P126 229 aa22.77■■□□□ 1.24
GTF3A-203ENST00000435781 BARX2Q9UMQ3 279 aaPredicted RBP22.77■■□□□ 1.24
GTF3A-203ENST00000435781 SSX2IPQ9Y2D8 614 aa22.77■■□□□ 1.24
GTF3A-203ENST00000435781 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.77■■□□□ 1.24
GTF3A-203ENST00000435781 KIAA0391O15091 583 aaKnown RBP22.76■■□□□ 1.23
GTF3A-203ENST00000435781 XPOTO43592 962 aaKnown RBP22.76■■□□□ 1.23
GTF3A-203ENST00000435781 EXTL3O43909 919 aa22.76■■□□□ 1.23
GTF3A-203ENST00000435781 GADD45BO75293 160 aaPredicted RBP22.76■■□□□ 1.23
GTF3A-203ENST00000435781 RHOBTB3O94955 611 aa22.76■■□□□ 1.23
GTF3A-203ENST00000435781 LDHAP00338 332 aaKnown RBP22.76■■□□□ 1.23
GTF3A-203ENST00000435781 NFICP08651 508 aa22.76■■□□□ 1.23
GTF3A-203ENST00000435781 CNPP09543 421 aaKnown RBP22.76■■□□□ 1.23
GTF3A-203ENST00000435781 CYP3A5P20815 502 aa22.76■■□□□ 1.23
GTF3A-203ENST00000435781 LLGL2Q6P1M3 1020 aa22.76■■□□□ 1.23
GTF3A-203ENST00000435781 BRSK2Q8IWQ3 736 aa22.76■■□□□ 1.23
GTF3A-203ENST00000435781 GPR65Q8IYL9 337 aa22.76■■□□□ 1.23
GTF3A-203ENST00000435781 CCDC47Q96A33 483 aaKnown RBP22.76■■□□□ 1.23
GTF3A-203ENST00000435781 KLHL5Q96PQ7 755 aa22.76■■□□□ 1.23
GTF3A-203ENST00000435781 EMILIN2Q9BXX0 1053 aa22.76■■□□□ 1.23
GTF3A-203ENST00000435781 AGPAT3Q9NRZ7 376 aa22.76■■□□□ 1.23
GTF3A-203ENST00000435781 DERAQ9Y315 318 aa22.76■■□□□ 1.23
GTF3A-203ENST00000435781 HCFC2Q9Y5Z7 792 aa22.76■■□□□ 1.23
GTF3A-203ENST00000435781 BDP1A6H8Y1 2624 aa22.75■■□□□ 1.23
GTF3A-203ENST00000435781 IL18RAPO95256 599 aa22.75■■□□□ 1.23
GTF3A-203ENST00000435781 LRPAP1P30533 357 aa22.75■■□□□ 1.23
GTF3A-203ENST00000435781 GUCY2FP51841 1108 aa22.75■■□□□ 1.23
GTF3A-203ENST00000435781 TMEM132DQ14C87 1099 aa22.75■■□□□ 1.23
GTF3A-203ENST00000435781 KNOP1Q1ED39 458 aaKnown RBP22.75■■□□□ 1.23
GTF3A-203ENST00000435781 RTP2Q5QGT7 225 aa22.75■■□□□ 1.23
GTF3A-203ENST00000435781 TMEM184AQ6ZMB5 413 aa22.75■■□□□ 1.23
GTF3A-203ENST00000435781 GPD1LQ8N335 351 aa22.75■■□□□ 1.23
GTF3A-203ENST00000435781 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.75■■□□□ 1.23
GTF3A-203ENST00000435781 NOC3LQ8WTT2 800 aaKnown RBP22.75■■□□□ 1.23
GTF3A-203ENST00000435781 RIN2Q8WYP3 895 aaPredicted RBP22.75■■□□□ 1.23
GTF3A-203ENST00000435781 MSLNLQ96KJ4 702 aa22.75■■□□□ 1.23
GTF3A-203ENST00000435781 TTPALQ9BTX7 342 aa22.75■■□□□ 1.23
GTF3A-203ENST00000435781 RXFP1Q9HBX9 757 aa22.75■■□□□ 1.23
GTF3A-203ENST00000435781 HSPBP1Q9NZL4 362 aa22.75■■□□□ 1.23
GTF3A-203ENST00000435781 I3L4J1 428 aa22.74■■□□□ 1.23
GTF3A-203ENST00000435781 BMP1P13497 986 aa22.74■■□□□ 1.23
GTF3A-203ENST00000435781 BRCC3P46736 316 aa22.74■■□□□ 1.23
GTF3A-203ENST00000435781 WNT7BP56706 349 aa22.74■■□□□ 1.23
GTF3A-203ENST00000435781 SNRPFP62306 86 aaKnown RBP22.74■■□□□ 1.23
GTF3A-203ENST00000435781 PNOCQ13519 176 aa22.74■■□□□ 1.23
GTF3A-203ENST00000435781 KCNB1Q14721 858 aa22.74■■□□□ 1.23
GTF3A-203ENST00000435781 CLUL1Q15846 466 aa22.74■■□□□ 1.23
GTF3A-203ENST00000435781 SPATA1Q5VX52 437 aa22.74■■□□□ 1.23
GTF3A-203ENST00000435781 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.74■■□□□ 1.23
GTF3A-203ENST00000435781 HS2ST1Q7LGA3 356 aa22.74■■□□□ 1.23
GTF3A-203ENST00000435781 BEST2Q8NFU1 509 aa22.74■■□□□ 1.23
GTF3A-203ENST00000435781 SLC22A17Q8WUG5 538 aa22.74■■□□□ 1.23
GTF3A-203ENST00000435781 TIGD1Q96MW7 591 aa22.74■■□□□ 1.23
GTF3A-203ENST00000435781 TSHZ2Q9NRE2 1034 aa22.74■■□□□ 1.23
GTF3A-203ENST00000435781 RBAKQ9NYW8 714 aaPredicted RBP22.74■■□□□ 1.23
GTF3A-203ENST00000435781 C2CD2Q9Y426 696 aa22.74■■□□□ 1.23
GTF3A-203ENST00000435781 CLIC2O15247 247 aa22.73■■□□□ 1.23
GTF3A-203ENST00000435781 TEX28O15482 410 aa22.73■■□□□ 1.23
GTF3A-203ENST00000435781 TRAPPC3O43617 180 aa22.73■■□□□ 1.23
GTF3A-203ENST00000435781 SRGAP2BP0DMP2 458 aa22.73■■□□□ 1.23
GTF3A-203ENST00000435781 FGFR3P22607 806 aa22.73■■□□□ 1.23
GTF3A-203ENST00000435781 KLRC2P26717 231 aa22.73■■□□□ 1.23
GTF3A-203ENST00000435781 PRSS55Q6UWB4 352 aaPredicted RBP22.73■■□□□ 1.23
GTF3A-203ENST00000435781 CEP57Q86XR8 500 aa22.73■■□□□ 1.23
GTF3A-203ENST00000435781 EFCAB13Q8IY85 973 aa22.73■■□□□ 1.23
GTF3A-203ENST00000435781 PIK3R5Q8WYR1 880 aa22.73■■□□□ 1.23
GTF3A-203ENST00000435781 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.73■■□□□ 1.23
GTF3A-203ENST00000435781 CGNQ9P2M7 1197 aaKnown RBP22.73■■□□□ 1.23
GTF3A-203ENST00000435781 CD207Q9UJ71 328 aa22.73■■□□□ 1.23
GTF3A-203ENST00000435781 NUB1Q9Y5A7 615 aa22.73■■□□□ 1.23
GTF3A-203ENST00000435781 TSC2P49815 1807 aa22.73■■□□□ 1.23
GTF3A-203ENST00000435781 ADH1AP07327 375 aa22.72■■□□□ 1.23
GTF3A-203ENST00000435781 EPCAMP16422 314 aa22.72■■□□□ 1.23
GTF3A-203ENST00000435781 PTCRAQ6ISU1 281 aaPredicted RBP22.72■■□□□ 1.23
GTF3A-203ENST00000435781 ANKRD54Q6NXT1 300 aa22.72■■□□□ 1.23
GTF3A-203ENST00000435781 PPFIBP1Q86W92 1011 aa22.72■■□□□ 1.23
GTF3A-203ENST00000435781 C12orf56Q8IXR9 622 aa22.72■■□□□ 1.23
GTF3A-203ENST00000435781 CASP10Q92851 521 aa22.72■■□□□ 1.23
GTF3A-203ENST00000435781 IPO9Q96P70 1041 aaKnown RBP22.72■■□□□ 1.23
GTF3A-203ENST00000435781 FNIP2Q9P278 1114 aa22.72■■□□□ 1.23
GTF3A-203ENST00000435781 C2orf16Q68DN1 1984 aa22.72■■□□□ 1.23
GTF3A-203ENST00000435781 RPL17P18621 184 aaKnown RBP22.71■■□□□ 1.23
GTF3A-203ENST00000435781 TKTP29401 623 aaKnown RBP22.71■■□□□ 1.23
GTF3A-203ENST00000435781 CYP2J2P51589 502 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms