RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 CRELD2Q6UXH1 353 aaPredicted RBP19.86■□□□□ 0.77
CLK1-205ENST00000434813 DLK2Q6UY11 383 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 USP50Q70EL3 339 aaPredicted RBP19.86■□□□□ 0.77
CLK1-205ENST00000434813 ZNF473Q8WTR7 871 aaKnown RBP19.86■□□□□ 0.77
CLK1-205ENST00000434813 TMEM143Q96AN5 459 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 SNCAIPQ9Y6H5 919 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 IGKV6D-21A0A0A0MT36 114 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 ANKRD65E5RJM6 399 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 VNN1O95497 513 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 ECEL1O95672 775 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 CALCAP01258 141 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 ACO1P21399 889 aaKnown RBP19.85■□□□□ 0.77
CLK1-205ENST00000434813 MAGOHP61326 146 aaKnown RBP19.85■□□□□ 0.77
CLK1-205ENST00000434813 ODF2Q5BJF6 829 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 SH3D19Q5HYK7 790 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 DEPTORQ8TB45 409 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 SLC7A3Q8WY07 619 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 ART4Q93070 314 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 L3MBTL3Q96JM7 780 aaPredicted RBP19.85■□□□□ 0.77
CLK1-205ENST00000434813 CEP89Q96ST8 783 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 NIFKQ9BYG3 293 aaKnown RBP19.85■□□□□ 0.77
CLK1-205ENST00000434813 HAPLN2Q9GZV7 340 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 LRRC4CQ9HCJ2 640 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 RBAKQ9NYW8 714 aaPredicted RBP19.85■□□□□ 0.77
CLK1-205ENST00000434813 DCDC2CA8MYV0 355 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 CLDN3O15551 220 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 LDHAP00338 332 aaKnown RBP19.85■□□□□ 0.77
CLK1-205ENST00000434813 RRM1P23921 792 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 NSFP46459 744 aaKnown RBP19.85■□□□□ 0.77
CLK1-205ENST00000434813 ACOT2P49753 483 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 MON1BQ7L1V2 547 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 C3orf20Q8ND61 904 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 PPM1EQ8WY54 764 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 PGM2Q96G03 612 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 CCT8L2Q96SF2 557 aa19.85■□□□□ 0.77
CLK1-205ENST00000434813 LRRIQ4A6NIV6 560 aa19.84■□□□□ 0.77
CLK1-205ENST00000434813 SHBGP04278 402 aa19.84■□□□□ 0.77
CLK1-205ENST00000434813 SEC24CP53992 1094 aa19.84■□□□□ 0.77
CLK1-205ENST00000434813 CUL2Q13617 745 aa19.84■□□□□ 0.77
CLK1-205ENST00000434813 SLMAPQ14BN4 828 aa19.84■□□□□ 0.77
CLK1-205ENST00000434813 TRIM72Q6ZMU5 477 aa19.84■□□□□ 0.77
CLK1-205ENST00000434813 RNF25Q96BH1 459 aaPredicted RBP19.84■□□□□ 0.77
CLK1-205ENST00000434813 CGRRF1Q99675 332 aa19.84■□□□□ 0.77
CLK1-205ENST00000434813 CNOT10Q9H9A5 744 aaKnown RBP19.84■□□□□ 0.77
CLK1-205ENST00000434813 POLR2AP24928 1970 aaKnown RBP19.84■□□□□ 0.77
CLK1-205ENST00000434813 A0A087WUV0 522 aaPredicted RBP19.83■□□□□ 0.77
CLK1-205ENST00000434813 E7EVH7 732 aa19.83■□□□□ 0.77
CLK1-205ENST00000434813 K7ERI5 159 aa19.83■□□□□ 0.77
CLK1-205ENST00000434813 EPHX2P34913 555 aa19.83■□□□□ 0.77
CLK1-205ENST00000434813 RFC5P40937 340 aa19.83■□□□□ 0.77
CLK1-205ENST00000434813 BYSLQ13895 437 aaKnown RBP19.83■□□□□ 0.77
CLK1-205ENST00000434813 SPOPLQ6IQ16 392 aa19.83■□□□□ 0.77
CLK1-205ENST00000434813 CROCCP2Q86T23 111 aa19.83■□□□□ 0.77
CLK1-205ENST00000434813 ZC3H15Q8WU90 426 aaKnown RBP19.83■□□□□ 0.77
CLK1-205ENST00000434813 MAIP1Q8WWC4 291 aa19.83■□□□□ 0.77
CLK1-205ENST00000434813 CPA5Q8WXQ8 436 aa19.83■□□□□ 0.77
CLK1-205ENST00000434813 MSTO1Q9BUK6 570 aa19.83■□□□□ 0.77
CLK1-205ENST00000434813 TRIM7Q9C029 511 aa19.83■□□□□ 0.77
CLK1-205ENST00000434813 APOBEC3GQ9HC16 384 aaKnown RBP19.83■□□□□ 0.77
CLK1-205ENST00000434813 ADGRA2Q96PE1 1338 aa19.83■□□□□ 0.77
CLK1-205ENST00000434813 A0A0B4J269 797 aa19.83■□□□□ 0.76
CLK1-205ENST00000434813 TRAPPC3O43617 180 aa19.83■□□□□ 0.76
CLK1-205ENST00000434813 CAND2O75155 1236 aa19.83■□□□□ 0.76
CLK1-205ENST00000434813 ALDH5A1P51649 535 aaPredicted RBP19.83■□□□□ 0.76
CLK1-205ENST00000434813 PTP4A2Q12974 167 aa19.83■□□□□ 0.76
CLK1-205ENST00000434813 SGO2Q562F6 1265 aa19.83■□□□□ 0.76
CLK1-205ENST00000434813 TADA2BQ86TJ2 420 aa19.83■□□□□ 0.76
CLK1-205ENST00000434813 PTPN22Q9Y2R2 807 aa19.83■□□□□ 0.76
CLK1-205ENST00000434813 CLTAP09496 248 aa19.82■□□□□ 0.76
CLK1-205ENST00000434813 UBA1P22314 1058 aaKnown RBP19.82■□□□□ 0.76
CLK1-205ENST00000434813 TBXAS1P24557 533 aaPredicted RBP19.82■□□□□ 0.76
CLK1-205ENST00000434813 MAN1A1P33908 653 aa19.82■□□□□ 0.76
CLK1-205ENST00000434813 KCNJ1P48048 391 aa19.82■□□□□ 0.76
CLK1-205ENST00000434813 CNTN2Q02246 1040 aa19.82■□□□□ 0.76
CLK1-205ENST00000434813 FSTL1Q12841 308 aa19.82■□□□□ 0.76
CLK1-205ENST00000434813 MICALCLQ6ZW33 695 aa19.82■□□□□ 0.76
CLK1-205ENST00000434813 ANKRD35Q8N283 1001 aa19.82■□□□□ 0.76
CLK1-205ENST00000434813 ZBTB45Q96K62 511 aaPredicted RBP19.82■□□□□ 0.76
CLK1-205ENST00000434813 TMEM109Q9BVC6 243 aa19.82■□□□□ 0.76
CLK1-205ENST00000434813 TARS2Q9BW92 718 aaKnown RBP19.82■□□□□ 0.76
CLK1-205ENST00000434813 TMEM134Q9H6X4 195 aa19.82■□□□□ 0.76
CLK1-205ENST00000434813 ANKFY1Q9P2R3 1169 aa19.82■□□□□ 0.76
CLK1-205ENST00000434813 GGA2Q9UJY4 613 aa19.82■□□□□ 0.76
CLK1-205ENST00000434813 CNTN6Q9UQ52 1028 aa19.82■□□□□ 0.76
CLK1-205ENST00000434813 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.82■□□□□ 0.76
CLK1-205ENST00000434813 UMODL1Q5DID0 1318 aa19.82■□□□□ 0.76
CLK1-205ENST00000434813 LRRC37A2A6NM11 1700 aa19.82■□□□□ 0.76
CLK1-205ENST00000434813 PROSCO94903 275 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 CPP00450 1065 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 RARGP13631 454 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 TMOD1P28289 359 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 CDR1P51861 262 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 NOMO3P69849 1222 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 TTLL12Q14166 644 aaPredicted RBP19.81■□□□□ 0.76
CLK1-205ENST00000434813 SLC29A2Q14542 456 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 TARBP2Q15633 366 aaKnown RBP19.81■□□□□ 0.76
CLK1-205ENST00000434813 ZBTB41Q5SVQ8 909 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 PPP1R2P3Q6NXS1 205 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 CYFIP2Q96F07 1278 aa19.81■□□□□ 0.76
CLK1-205ENST00000434813 DDX27Q96GQ7 796 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms