RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 VCPP55072 806 aaKnown RBP19.5■□□□□ 0.71
CPNE1-213ENST00000434795 CEBPZQ03701 1054 aaKnown RBP19.5■□□□□ 0.71
CPNE1-213ENST00000434795 SLC39A14Q15043 492 aa19.5■□□□□ 0.71
CPNE1-213ENST00000434795 PPM1LQ5SGD2 360 aa19.5■□□□□ 0.71
CPNE1-213ENST00000434795 AXDND1Q5T1B0 1012 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-213ENST00000434795 RTL10Q7L3V2 364 aa19.5■□□□□ 0.71
CPNE1-213ENST00000434795 RSAD2Q8WXG1 361 aa19.5■□□□□ 0.71
CPNE1-213ENST00000434795 BICD1Q96G01 975 aa19.5■□□□□ 0.71
CPNE1-213ENST00000434795 ZSCAN16Q9H4T2 348 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-213ENST00000434795 CCDC39Q9UFE4 941 aa19.5■□□□□ 0.71
CPNE1-213ENST00000434795 MORC2Q9Y6X9 1032 aaPredicted RBP19.5■□□□□ 0.71
CPNE1-213ENST00000434795 MTCL1Q9Y4B5 1905 aaKnown RBP19.5■□□□□ 0.71
CPNE1-213ENST00000434795 LACTBL1A8MY62 500 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 SYN3O14994 580 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 STX6O43752 255 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 ABLIM3O94929 683 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 C8AP07357 584 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 CXCL8P10145 99 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 MATR3P43243 847 aaKnown RBP eCLIP19.49■□□□□ 0.71
CPNE1-213ENST00000434795 LIG4P49917 911 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 NHLH1Q02575 133 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 SPAG1Q07617 926 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 KYAT1Q16773 422 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 VARS2Q5ST30 1063 aaKnown RBP19.49■□□□□ 0.71
CPNE1-213ENST00000434795 ZBTB41Q5SVQ8 909 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 SLC8B1Q6J4K2 584 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 SLC39A4Q6P5W5 647 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 ZNF720Q7Z2F6 126 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 GRASPQ7Z6J2 395 aaPredicted RBP19.49■□□□□ 0.71
CPNE1-213ENST00000434795 TMEM130Q8N3G9 435 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 SLC44A3Q8N4M1 653 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 PRSS33Q8NF86 280 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 ZNF461Q8TAF7 563 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 SUSD3Q96L08 255 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 USP28Q96RU2 1077 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 ST6GALNAC4Q9H4F1 302 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 ZHX3Q9H4I2 956 aa19.49■□□□□ 0.71
CPNE1-213ENST00000434795 PIEZO1Q92508 2521 aa19.48■□□□□ 0.71
CPNE1-213ENST00000434795 ANKRD63C9JTQ0 380 aa19.48■□□□□ 0.71
CPNE1-213ENST00000434795 K7ENM7 598 aa19.48■□□□□ 0.71
CPNE1-213ENST00000434795 OGTO15294 1046 aa19.48■□□□□ 0.71
CPNE1-213ENST00000434795 NTHL1P78549 312 aa19.48■□□□□ 0.71
CPNE1-213ENST00000434795 ENOX2Q16206 610 aaKnown RBP19.48■□□□□ 0.71
CPNE1-213ENST00000434795 ZC2HC1CQ53FD0 456 aaPredicted RBP19.48■□□□□ 0.71
CPNE1-213ENST00000434795 LIN9Q5TKA1 542 aa19.48■□□□□ 0.71
CPNE1-213ENST00000434795 RRAGBQ5VZM2 374 aa19.48■□□□□ 0.71
CPNE1-213ENST00000434795 KRI1Q8N9T8 703 aaKnown RBP19.48■□□□□ 0.71
CPNE1-213ENST00000434795 SNX21Q969T3 373 aa19.48■□□□□ 0.71
CPNE1-213ENST00000434795 NXPE3Q969Y0 559 aa19.48■□□□□ 0.71
CPNE1-213ENST00000434795 PANK2Q9BZ23 570 aa19.48■□□□□ 0.71
CPNE1-213ENST00000434795 STK17AQ9UEE5 414 aa19.48■□□□□ 0.71
CPNE1-213ENST00000434795 TUBGCP4Q9UGJ1 667 aa19.48■□□□□ 0.71
CPNE1-213ENST00000434795 NUB1Q9Y5A7 615 aa19.48■□□□□ 0.71
CPNE1-213ENST00000434795 C2orf16Q68DN1 1984 aa19.48■□□□□ 0.71
CPNE1-213ENST00000434795 MYMKA6NI61 221 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 ANHXE9PGG2 379 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 HNRNPDLO14979 420 aaKnown RBP19.47■□□□□ 0.71
CPNE1-213ENST00000434795 CCL16O15467 120 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 POU2F2P09086 479 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 CYP3A5P20815 502 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 FSHRP23945 695 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 LRPAP1P30533 357 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 DYMQ7RTS9 669 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 MAP4K3Q8IVH8 894 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 SLC7A14Q8TBB6 771 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 DDX12PQ92771 950 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 DNAJC19Q96DA6 116 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 TSPAN18Q96SJ8 248 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 PRRX2Q99811 253 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 STRA6Q9BX79 667 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 CPSF3Q9UKF6 684 aaKnown RBP19.47■□□□□ 0.71
CPNE1-213ENST00000434795 DUSP12Q9UNI6 340 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 STYXL1Q9Y6J8 313 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 VWA8A3KMH1 1905 aa19.47■□□□□ 0.71
CPNE1-213ENST00000434795 DENND4AQ7Z401 1863 aa19.46■□□□□ 0.71
CPNE1-213ENST00000434795 H7C4K7 107 aa19.46■□□□□ 0.71
CPNE1-213ENST00000434795 NARSO43776 548 aaKnown RBP19.46■□□□□ 0.71
CPNE1-213ENST00000434795 TBCAO75347 108 aaKnown RBP19.46■□□□□ 0.71
CPNE1-213ENST00000434795 ABCD1P33897 745 aa19.46■□□□□ 0.71
CPNE1-213ENST00000434795 ROR1Q01973 937 aa19.46■□□□□ 0.71
CPNE1-213ENST00000434795 TCF15Q12870 199 aa19.46■□□□□ 0.71
CPNE1-213ENST00000434795 SV2BQ7L1I2 683 aa19.46■□□□□ 0.71
CPNE1-213ENST00000434795 KIF12Q96FN5 646 aa19.46■□□□□ 0.71
CPNE1-213ENST00000434795 RPF1Q9H9Y2 349 aaKnown RBP19.46■□□□□ 0.71
CPNE1-213ENST00000434795 DNMT3BQ9UBC3 853 aaKnown RBP19.46■□□□□ 0.71
CPNE1-213ENST00000434795 FBXL5Q9UKA1 691 aa19.46■□□□□ 0.71
CPNE1-213ENST00000434795 ZFP37Q9Y6Q3 630 aaPredicted RBP19.46■□□□□ 0.71
CPNE1-213ENST00000434795 WDR27A2RRH5 827 aa19.45■□□□□ 0.7
CPNE1-213ENST00000434795 M0QZQ0 153 aa19.45■□□□□ 0.7
CPNE1-213ENST00000434795 XYLBO75191 536 aa19.45■□□□□ 0.7
CPNE1-213ENST00000434795 ATF2P15336 505 aa19.45■□□□□ 0.7
CPNE1-213ENST00000434795 NPR3P17342 541 aa19.45■□□□□ 0.7
CPNE1-213ENST00000434795 NASPP49321 788 aaPredicted RBP19.45■□□□□ 0.7
CPNE1-213ENST00000434795 NUBP1P53384 320 aa19.45■□□□□ 0.7
CPNE1-213ENST00000434795 GET4Q7L5D6 327 aaPredicted RBP19.45■□□□□ 0.7
CPNE1-213ENST00000434795 CD302Q8IX05 232 aa19.45■□□□□ 0.7
CPNE1-213ENST00000434795 APPL2Q8NEU8 664 aa19.45■□□□□ 0.7
CPNE1-213ENST00000434795 ITFG1Q8TB96 612 aa19.45■□□□□ 0.7
CPNE1-213ENST00000434795 MSTO1Q9BUK6 570 aa19.45■□□□□ 0.7
CPNE1-213ENST00000434795 HCFC1R1Q9NWW0 138 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms