RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 SENP7Q9BQF6 1050 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 C17orf80Q9BSJ5 609 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 APEX2Q9UBZ4 518 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 C6orf10Q5SRN2 563 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 RRM2BQ7LG56 351 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 IFNEQ86WN2 208 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 ELMO2Q96JJ3 720 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 BATF3Q9NR55 127 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 MYL2P10916 166 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 GYS1P13807 737 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 HNRNPH1P31943 449 aaKnown RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 RCN1Q15293 331 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 PID1Q7Z2X4 250 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 C9orf72Q96LT7 481 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 FBXO2Q9UK22 296 aaPredicted RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 ZBTB39O15060 712 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 CDH16O75309 829 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 SNRNP48Q6IEG0 339 aaKnown RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 RCOR2Q8IZ40 523 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 STAP1Q9ULZ2 295 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 FXR1P51114 621 aaKnown RBP eCLIP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 LRRC74AQ0VAA2 488 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 THEMIS2Q5TEJ8 643 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 SYDE1Q6ZW31 735 aaPredicted RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 TASP1Q9H6P5 420 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 TOPORSQ9NS56 1045 aaPredicted RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 USE1Q9NZ43 259 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 AGO2Q9UKV8 859 aaKnown RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 ERVV-1B6SEH8 477 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 TBL3Q12788 808 aaKnown RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 STXBP2Q15833 593 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 PLEKHM3Q6ZWE6 761 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 VPS50Q96JG6 964 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 SH2D3AQ9BRG2 576 aa12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 RANBP17Q9H2T7 1088 aaKnown RBP12.32□□□□□ -0.44
RIMKLA-202ENST00000431473 ORC4O43929 436 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 DDX42Q86XP3 938 aaKnown RBP eCLIP12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 BTN2A2Q8WVV5 523 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 GOLPH3Q9H4A6 298 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 METP08581 1390 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 IRAK1P51617 712 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 CPSF1Q10570 1443 aaKnown RBP12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 DPYDQ12882 1025 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 KIZQ2M2Z5 673 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 NOA1Q8NC60 698 aaKnown RBP12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 TEKT4Q8WW24 435 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 FAM162AQ96A26 154 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 SH3KBP1Q96B97 665 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 LZTS3O60299 673 aaPredicted RBP12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 NFKBIAP25963 317 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 SLC1A1P43005 524 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 DUOXA2Q1HG44 320 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 TTC39BQ5VTQ0 682 aaPredicted RBP12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 ASIC4Q96FT7 647 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 FAM20AQ96MK3 541 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 MANSC1Q9H8J5 431 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 NMT1P30419 496 aaKnown RBP12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 PDAP1Q13442 181 aaKnown RBP12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 CCDC103Q8IW40 242 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 MFN1Q8IWA4 741 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 XPO6Q96QU8 1125 aaKnown RBP12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 BRD8Q9H0E9 1235 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 RGL1Q9NZL6 768 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 FEM1BQ9UK73 627 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 CRKP46108 304 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 POTEAQ6S8J7 498 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 FLAD1Q8NFF5 587 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 STK33Q9BYT3 514 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 DCP1AQ9NPI6 582 aaPredicted RBP12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 IQGAP3Q86VI3 1631 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 MYH15Q9Y2K3 1946 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 GRAP2O75791 330 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 PSMC5P62195 406 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 KIF2CQ99661 725 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 CHMP2BQ9UQN3 213 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 HECW2Q9P2P5 1572 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 GYPCP04921 128 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 SULT1E1P49888 294 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 GALCP54803 685 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 TPI1P60174 286 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 CYLC2Q14093 348 aaPredicted RBP12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 AGBL2Q5U5Z8 902 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 SNRNP27Q8WVK2 155 aaKnown RBP12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 PTPRN2Q92932 1015 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 KIF12Q96FN5 646 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 SMAD5Q99717 465 aaKnown RBP12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 TBC1D22BQ9NU19 505 aa12.31□□□□□ -0.44
RIMKLA-202ENST00000431473 PIGBQ92521 554 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 OTUB1Q96FW1 271 aaPredicted RBP12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 ZNF556Q9HAH1 456 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 NOD2Q9HC29 1040 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 HMOX2P30519 316 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 SLC29A2Q14542 456 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 CEP78Q5JTW2 689 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 ZCCHC11Q5TAX3 1644 aaKnown RBP12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 FAM107AO95990 144 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 GRAPQ13588 217 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 KCNB1Q14721 858 aa12.3□□□□□ -0.44
RIMKLA-202ENST00000431473 CLEC17AQ6ZS10 378 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms