RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 RAB20Q9NX57 234 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 L3MBTL1Q9Y468 752 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 CCT8L1PA6NM43 557 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 SMAPO00193 183 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 ZBED4O75132 1171 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 PLS3P13797 630 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 JAM2P57087 298 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 ANKRD20A8PQ5CZ79 823 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 HHATQ5VTY9 493 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 CDR2LQ86X02 465 aaPredicted RBP8.57□□□□□ -1.04
HPS4-205ENST00000429411 ANKMY2Q8IV38 441 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 EPS8L1Q8TE68 723 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 TGS1Q96RS0 853 aaKnown RBP8.57□□□□□ -1.04
HPS4-205ENST00000429411 KLF6Q99612 283 aaPredicted RBP8.57□□□□□ -1.04
HPS4-205ENST00000429411 WNT8AQ9H1J5 351 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 ABCF3Q9NUQ8 709 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 KIAA1522Q9P206 1035 aaPredicted RBP8.57□□□□□ -1.04
HPS4-205ENST00000429411 NXF1Q9UBU9 619 aaKnown RBP8.57□□□□□ -1.04
HPS4-205ENST00000429411 IGLV3-22A0A075B6J6 115 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 A0A0A6YYK5 440 aaPredicted RBP8.57□□□□□ -1.04
HPS4-205ENST00000429411 DYTNA2CJ06 578 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 KRT1P04264 644 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 CYP3A4P08684 503 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 HSPA6P17066 643 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 NAT1P18440 290 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 CA4P22748 312 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 MARK3P27448 753 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 ATP5DP30049 168 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 ECHS1P30084 290 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 PSMC4P43686 418 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 BAATQ14032 418 aaPredicted RBP8.57□□□□□ -1.04
HPS4-205ENST00000429411 SETDB1Q15047 1291 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 UGCGQ16739 394 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 IZUMO3Q5VZ72 239 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 CD302Q8IX05 232 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.57□□□□□ -1.04
HPS4-205ENST00000429411 SEMA4DQ92854 862 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 IWS1Q96ST2 819 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 ZWILCHQ9H900 591 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 INTUQ9ULD6 942 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 GINS2Q9Y248 185 aa8.57□□□□□ -1.04
HPS4-205ENST00000429411 LY75O60449 1722 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 MYH1P12882 1939 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 MYH4Q9Y623 1939 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 GTPBP10A4D1E9 387 aaKnown RBP8.56□□□□□ -1.04
HPS4-205ENST00000429411 PIK3R2O00459 728 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 TLR3O15455 904 aaKnown RBP8.56□□□□□ -1.04
HPS4-205ENST00000429411 ATP9AO75110 1047 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 UBOX5O94941 541 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 CHKAP35790 457 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 LACTBP83111 547 aaPredicted RBP8.56□□□□□ -1.04
HPS4-205ENST00000429411 BIRC2Q13490 618 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 NBPF12Q5TAG4 269 aaPredicted RBP8.56□□□□□ -1.04
HPS4-205ENST00000429411 DUPD1Q68J44 220 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 SV2AQ7L0J3 742 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 TRPM8Q7Z2W7 1104 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 C11orf96Q7Z7L8 435 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 C2orf69Q8N8R5 385 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 MKL1Q969V6 931 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 PITPNM3Q9BZ71 974 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 FAM129AQ9BZQ8 928 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 C10orf88Q9H8K7 445 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 ECT2Q9H8V3 914 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 ZNF70Q9UC06 446 aaPredicted RBP8.56□□□□□ -1.04
HPS4-205ENST00000429411 IKBKGQ9Y6K9 419 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 FRMPD4Q14CM0 1322 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 RIPK2O43353 540 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 GH1P01241 217 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 PEX19P40855 299 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 TKFCQ3LXA3 575 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 ATP13A4Q4VNC1 1196 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.56□□□□□ -1.04
HPS4-205ENST00000429411 DCTN4Q9UJW0 460 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 MYH7BA7E2Y1 1941 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 WDR64B1ANS9 1081 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 ATP2A1O14983 1001 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 ASNSP08243 561 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 SRGAP2CP0DJJ0 459 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 NAT2P11245 290 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 BDNFP23560 247 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 CIITAP33076 1130 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 NPTX2P47972 431 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 TFAMQ00059 246 aaKnown RBP8.56□□□□□ -1.04
HPS4-205ENST00000429411 GPS1Q13098 491 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 DNAJC3Q13217 504 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 TRPC3Q13507 836 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 MTMR2Q13614 643 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 NEDD9Q14511 834 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 SMTNL2Q2TAL5 461 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 P3H1Q32P28 736 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 CTAGE3PQ8IX95 158 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 FUKQ8N0W3 1084 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 PRPF38AQ8NAV1 312 aaKnown RBP8.56□□□□□ -1.04
HPS4-205ENST00000429411 GMCL1P1Q8NEA9 526 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 PRCCQ92733 491 aaPredicted RBP8.56□□□□□ -1.04
HPS4-205ENST00000429411 BORCS6Q96GS4 357 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 RSRC1Q96IZ7 334 aaKnown RBP8.56□□□□□ -1.04
HPS4-205ENST00000429411 KREMEN1Q96MU8 473 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 FAM167BQ9BTA0 163 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 PCSK1NQ9UHG2 260 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms