RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 CTNNBL1Q8WYA6 563 aaPredicted RBP14.39□□□□□ -0.11
SENP3-202ENST00000429205 BAP1Q92560 729 aa14.39□□□□□ -0.11
SENP3-202ENST00000429205 KIFAP3Q92845 792 aa14.39□□□□□ -0.11
SENP3-202ENST00000429205 CGREF1Q99674 301 aa14.39□□□□□ -0.11
SENP3-202ENST00000429205 PTPN18Q99952 460 aa14.39□□□□□ -0.11
SENP3-202ENST00000429205 RHOXF2Q9BQY4 288 aa14.39□□□□□ -0.11
SENP3-202ENST00000429205 TMEM206Q9H813 350 aa14.39□□□□□ -0.11
SENP3-202ENST00000429205 LRRD1A4D1F6 860 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 RNF40O75150 1001 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 CCNA1P78396 465 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 SULT2A1Q06520 285 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 DMP1Q13316 513 aaPredicted RBP14.38□□□□□ -0.11
SENP3-202ENST00000429205 RRAGAQ7L523 313 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 GPIHBP1Q8IV16 184 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 TMEM161BQ8NDZ6 487 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 BCAS4Q8TDM0 211 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 HVCN1Q96D96 273 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 MLXIPQ9HAP2 919 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 LZTFL1Q9NQ48 299 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 PLAGL2Q9UPG8 496 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 SH3GLB1Q9Y371 365 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 EPN1Q9Y6I3 576 aaPredicted RBP14.38□□□□□ -0.11
SENP3-202ENST00000429205 LRRC53A6NM62 1247 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 NDUFA10O95299 355 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 TFRCP02786 760 aaKnown RBP14.38□□□□□ -0.11
SENP3-202ENST00000429205 ENPP1P22413 925 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 PPP1R15BQ5SWA1 713 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 SLC9A9Q8IVB4 645 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 TTC39CQ8N584 583 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 MCPH1Q8NEM0 835 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 MPP4Q96JB8 637 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 SNX27Q96L92 541 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 CBWD1Q9BRT8 395 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 MKNK1Q9BUB5 465 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 EIF2AQ9BY44 585 aaKnown RBP14.38□□□□□ -0.11
SENP3-202ENST00000429205 CCDC68Q9H2F9 335 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 PCIF1Q9H4Z3 704 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 NLRC4Q9NPP4 1024 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 IKBKGQ9Y6K9 419 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 SLC4A7Q9Y6M7 1214 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 PCNTO95613 3336 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 MCM3APO60318 1980 aa14.38□□□□□ -0.11
SENP3-202ENST00000429205 EXOC3O60645 756 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 ZBTB48P10074 688 aaPredicted RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 HNRNPH3P31942 346 aaKnown RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 HUNKP57058 714 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 MRPS35P82673 323 aaKnown RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 SUZ12Q15022 739 aaKnown RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 HSDL1Q3SXM5 330 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 TMEM63BQ5T3F8 832 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 CACNA2D4Q7Z3S7 1137 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 LMNTD2Q8IXW0 634 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 RDH13Q8NBN7 331 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 UHMK1Q8TAS1 419 aaKnown RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 SEPT1Q8WYJ6 367 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 NHEJ1Q9H9Q4 299 aaPredicted RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 KMT5AQ9NQR1 393 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 PDGFCQ9NRA1 345 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 SSX2IPQ9Y2D8 614 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 REXO2Q9Y3B8 237 aaKnown RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 ARID2Q68CP9 1835 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 FAM25EA8MYX2 175 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 MGEA5O60502 916 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 CLASP2O75122 1294 aaKnown RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 PEX14O75381 377 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 PLEKP08567 350 aaPredicted RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 ACTN1P12814 892 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 SLC9A1P19634 815 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 ADORA2AP29274 412 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 HOXD12P35452 270 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 CTCFP49711 727 aaPredicted RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 STAT5BP51692 787 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 POLR2FP61218 127 aaKnown RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 SKOR1P84550 965 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 EMC2Q15006 297 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 CELF3Q5SZQ8 465 aaKnown RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 NANOGNBQ7Z5D8 188 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 SLC17A8Q8NDX2 589 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 GABPB2Q8TAK5 448 aaPredicted RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 NAF1Q96HR8 494 aaKnown RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 NTPCRQ9BSD7 190 aaKnown RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 EDEM3Q9BZQ6 932 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 POLR3FQ9H1D9 316 aaPredicted RBP14.37□□□□□ -0.11
SENP3-202ENST00000429205 C17orf75Q9HAS0 396 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 COMMD8Q9NX08 183 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 MKS1Q9NXB0 559 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 CEP72Q9P209 647 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 MORF4L1Q9UBU8 362 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 TBX20Q9UMR3 447 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 CARD8Q9Y2G2 431 aa14.37□□□□□ -0.11
SENP3-202ENST00000429205 ADGRA3Q8IWK6 1321 aa14.36□□□□□ -0.11
SENP3-202ENST00000429205 ZNFX1Q9P2E3 1918 aaKnown RBP14.36□□□□□ -0.11
SENP3-202ENST00000429205 DENND3A2RUS2 1198 aa14.36□□□□□ -0.11
SENP3-202ENST00000429205 TMEM247A6NEH6 219 aa14.36□□□□□ -0.11
SENP3-202ENST00000429205 SART1O43290 800 aaKnown RBP14.36□□□□□ -0.11
SENP3-202ENST00000429205 SYF2O95926 243 aaKnown RBP14.36□□□□□ -0.11
SENP3-202ENST00000429205 ITGBL1O95965 494 aaPredicted RBP14.36□□□□□ -0.11
SENP3-202ENST00000429205 ABL1P00519 1130 aa14.36□□□□□ -0.11
SENP3-202ENST00000429205 PDGFRBP09619 1106 aa14.36□□□□□ -0.11
SENP3-202ENST00000429205 POLGP54098 1239 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms