RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 WDR49Q8IV35 697 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 IFT81Q8WYA0 676 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 ALG3Q92685 438 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 CYFIP2Q96F07 1278 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 FAM81BQ96LP2 452 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 EPB41L5Q9HCM4 733 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 PTPRHQ9HD43 1115 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 GINS2Q9Y248 185 aa11.15□□□□□ -0.62
HDAC9-210ENST00000428307 DDX3YO15523 660 aaKnown RBP11.14□□□□□ -0.63
HDAC9-210ENST00000428307 ASAP2O43150 1006 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 HEXIM1O94992 359 aaKnown RBP11.14□□□□□ -0.63
HDAC9-210ENST00000428307 FGGP02679 453 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 CD58P19256 250 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 COMTP21964 271 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 PROZP22891 400 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 MAPK4P31152 587 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 TRADDQ15628 312 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 CLEC16AQ2KHT3 1053 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 DUSP28Q4G0W2 176 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 ZNF394Q53GI3 561 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 DCAF12L1Q5VU92 463 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 AADACL2Q6P093 401 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 LLGL2Q6P1M3 1020 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 ILDR2Q71H61 639 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 TMEM130Q8N3G9 435 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 ZNF564Q8TBZ8 553 aaPredicted RBP11.14□□□□□ -0.63
HDAC9-210ENST00000428307 KRT35Q92764 455 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 CPB2Q96IY4 423 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 SCLT1Q96NL6 688 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 DDX47Q9H0S4 455 aaKnown RBP11.14□□□□□ -0.63
HDAC9-210ENST00000428307 ABHD16BQ9H3Z7 469 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 CNOT8Q9UFF9 292 aaKnown RBP11.14□□□□□ -0.63
HDAC9-210ENST00000428307 TMEM59LQ9UK28 342 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 NR2E1Q9Y466 385 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 ZNFX1Q9P2E3 1918 aaKnown RBP11.14□□□□□ -0.63
HDAC9-210ENST00000428307 LRRC37A2A6NM11 1700 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 GPR25O00155 361 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 MAGEB2O15479 319 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 DYNC1LI2O43237 492 aaPredicted RBP11.14□□□□□ -0.63
HDAC9-210ENST00000428307 RAD51CO43502 376 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 TMEM191BP0C7N4 346 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 CXCL8P10145 99 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 TMOD1P28289 359 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 GNA15P30679 374 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 PHKA2P46019 1235 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 MARCKSL1P49006 195 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 ZNF157P51786 506 aaPredicted RBP11.14□□□□□ -0.63
HDAC9-210ENST00000428307 BPIFB4P59827 614 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 TNNC1P63316 161 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 IRX5P78411 483 aaPredicted RBP11.14□□□□□ -0.63
HDAC9-210ENST00000428307 TRPC3Q13507 836 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 GLE1Q53GS7 698 aaKnown RBP11.14□□□□□ -0.63
HDAC9-210ENST00000428307 RBBP8NLQ8NC74 664 aaPredicted RBP11.14□□□□□ -0.63
HDAC9-210ENST00000428307 OR6J1Q8NGC5 347 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 NLRP7Q8WX94 980 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 CDT1Q9H211 546 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 SETD4Q9NVD3 440 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 GTF3C4Q9UKN8 822 aa11.14□□□□□ -0.63
HDAC9-210ENST00000428307 IGF2BP3O00425 579 aaKnown RBP eCLIP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 SART1O43290 800 aaKnown RBP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 ASS1P00966 412 aaKnown RBP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 CYP1A2P05177 515 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 MMP3P08254 477 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 KRT19P08727 400 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 HOXC6P09630 235 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 WEE2P0C1S8 567 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 UNGP13051 313 aaPredicted RBP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 TBXAS1P24557 533 aaPredicted RBP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 OAS2P29728 719 aaKnown RBP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 CARSP49589 748 aaKnown RBP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 HADHBP55084 474 aaKnown RBP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 PPFIA1Q13136 1202 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 MTHFD1LQ6UB35 978 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 EFCAB13Q8IY85 973 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 EMID1Q96A84 441 aaPredicted RBP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 LENG1Q96BZ8 264 aaPredicted RBP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 RNPC3Q96LT9 517 aaKnown RBP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 PRMT7Q9NVM4 692 aaPredicted RBP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 TNFSF13BQ9Y275 285 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 H3BQF6 201 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 THAP12O43422 761 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 SPOPO43791 374 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 RRM1P23921 792 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 NSFP46459 744 aaKnown RBP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 AP3M2P53677 418 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 TNFAIP2Q03169 654 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 TMEM62Q0P6H9 643 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 GRIK4Q16099 956 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 DGKDQ16760 1214 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 SCARA5Q6ZMJ2 495 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 SND1Q7KZF4 910 aaKnown RBP eCLIP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 IFT20Q8IY31 132 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 RASGEF1CQ8N431 466 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 CCDC102AQ96A19 550 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 UBXN6Q9BZV1 441 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 TRIM7Q9C029 511 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 RPF1Q9H9Y2 349 aaKnown RBP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 NXF1Q9UBU9 619 aaKnown RBP11.13□□□□□ -0.63
HDAC9-210ENST00000428307 AMACRQ9UHK6 382 aa11.13□□□□□ -0.63
HDAC9-210ENST00000428307 NFU1Q9UMS0 254 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms