RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.95□□□□□ -0.82
SMC1A-203ENST00000428014 LOC730098B7Z3J9 87 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 NT5C1B-RDH14C9J2C7 533 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 TADA2AO75478 443 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 CNPP09543 421 aaKnown RBP9.95□□□□□ -0.82
SMC1A-203ENST00000428014 ALADP13716 330 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 CEBPZQ03701 1054 aaKnown RBP9.95□□□□□ -0.82
SMC1A-203ENST00000428014 DNM1Q05193 864 aaKnown RBP9.95□□□□□ -0.82
SMC1A-203ENST00000428014 ZP2Q05996 745 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 PPP2R3AQ06190 1150 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 PKP1Q13835 747 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 MRPL58Q14197 206 aaKnown RBP9.95□□□□□ -0.82
SMC1A-203ENST00000428014 MYBPC2Q14324 1141 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 SURF1Q15526 300 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 HERC4Q5GLZ8 1057 aaPredicted RBP9.95□□□□□ -0.82
SMC1A-203ENST00000428014 SPATA1Q5VX52 437 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 PLPP4Q5VZY2 271 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 SLC8B1Q6J4K2 584 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 KIAA1841Q6NSI8 718 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 CES5AQ6NT32 575 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 KANK3Q6NY19 840 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 SYCE2Q6PIF2 218 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 EPM2AIP1Q7L775 607 aaPredicted RBP9.95□□□□□ -0.82
SMC1A-203ENST00000428014 SFR1Q86XK3 245 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 TMEM87AQ8NBN3 555 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 VN1R2Q8NFZ6 395 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 GOLGA5Q8TBA6 731 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 ZNF507Q8TCN5 953 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 LEO1Q8WVC0 666 aaPredicted RBP9.95□□□□□ -0.82
SMC1A-203ENST00000428014 BICD1Q96G01 975 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 SUSD3Q96L08 255 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 SPATA32Q96LK8 384 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 FBXL18Q96ME1 805 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 RIPOR3Q96MK2 946 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 PLIN2Q99541 437 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 GPR62Q9BZJ7 368 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 GBP3Q9H0R5 595 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 MRPL44Q9H9J2 332 aaKnown RBP9.95□□□□□ -0.82
SMC1A-203ENST00000428014 RPF1Q9H9Y2 349 aaKnown RBP9.95□□□□□ -0.82
SMC1A-203ENST00000428014 PANK4Q9NVE7 773 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 MTRRQ9UBK8 725 aa9.95□□□□□ -0.82
SMC1A-203ENST00000428014 ARIH1Q9Y4X5 557 aaPredicted RBP9.95□□□□□ -0.82
SMC1A-203ENST00000428014 M0QZQ0 153 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 DPYSL4O14531 572 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 TEX28O15482 410 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 TBC1D4O60343 1298 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 B3GAT3O94766 335 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 KIF20AO95235 890 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 KIF4AO95239 1232 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 GLUD1P00367 558 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 HNRNPA1P09651 372 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMC1A-203ENST00000428014 FAM163BP0C2L3 166 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 PBX3P40426 434 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 KCNQ1P51787 676 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 MCCD1P59942 119 aaPredicted RBP9.94□□□□□ -0.82
SMC1A-203ENST00000428014 DLX2Q07687 328 aaPredicted RBP9.94□□□□□ -0.82
SMC1A-203ENST00000428014 RAD51AP2Q09MP3 1159 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 SMARCB1Q12824 385 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 RAB33AQ14088 237 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 SPECC1Q5M775 1068 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 TPGS2Q68CL5 300 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 SLC39A4Q6P5W5 647 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 CDR2LQ86X02 465 aaPredicted RBP9.94□□□□□ -0.82
SMC1A-203ENST00000428014 CEP57L1Q8IYX8 460 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 GJD3Q8N144 294 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 CEP120Q8N960 986 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 APPL2Q8NEU8 664 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 LNX1Q8TBB1 728 aaPredicted RBP9.94□□□□□ -0.82
SMC1A-203ENST00000428014 NXPE3Q969Y0 559 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 MSTO1Q9BUK6 570 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 C1QTNF1Q9BXJ1 281 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 AGO2Q9UKV8 859 aaKnown RBP9.94□□□□□ -0.82
SMC1A-203ENST00000428014 GDAQ9Y2T3 454 aa9.94□□□□□ -0.82
SMC1A-203ENST00000428014 PRG3Q9Y2Y8 225 aaPredicted RBP9.94□□□□□ -0.82
SMC1A-203ENST00000428014 ZFP37Q9Y6Q3 630 aaPredicted RBP9.94□□□□□ -0.82
SMC1A-203ENST00000428014 NPHP3-ACAD11A0A0J9YXS1 232 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 ANO9A1A5B4 782 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 PI4K2BG5E9Z4 385 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 H3BQ06 376 aaPredicted RBP9.93□□□□□ -0.82
SMC1A-203ENST00000428014 H7C4K7 107 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 PODXLO00592 558 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 POLR2DO15514 142 aaKnown RBP9.93□□□□□ -0.82
SMC1A-203ENST00000428014 OAZ2O95190 189 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 TYMPP19971 482 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 IBSPP21815 317 aaPredicted RBP9.93□□□□□ -0.82
SMC1A-203ENST00000428014 KLRC2P26717 231 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 NMT1P30419 496 aaKnown RBP9.93□□□□□ -0.82
SMC1A-203ENST00000428014 ADSSP30520 456 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 PNPLA4P41247 253 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 ENOX2Q16206 610 aaKnown RBP9.93□□□□□ -0.82
SMC1A-203ENST00000428014 NFIL3Q16649 462 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 LONRF3Q496Y0 759 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 FAM26FQ5R3K3 315 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 ATAT1Q5SQI0 421 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 CD300LGQ6UXG3 332 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 DYMQ7RTS9 669 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 GPR149Q86SP6 731 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 SLC9A9Q8IVB4 645 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 BRSK2Q8IWQ3 736 aa9.93□□□□□ -0.82
SMC1A-203ENST00000428014 BEST2Q8NFU1 509 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms