RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 APBB1IPQ7Z5R6 666 aaPredicted RBP16.98■□□□□ 0.31
PKP4-205ENST00000426248 KIFC3Q9BVG8 833 aa16.98■□□□□ 0.31
PKP4-205ENST00000426248 LSM14BQ9BX40 385 aaKnown RBP16.98■□□□□ 0.31
PKP4-205ENST00000426248 CASZ1Q86V15 1759 aa16.98■□□□□ 0.31
PKP4-205ENST00000426248 INO80B-WBP1J3KQ70 363 aa16.98■□□□□ 0.31
PKP4-205ENST00000426248 PGRMC1O00264 195 aaKnown RBP16.98■□□□□ 0.31
PKP4-205ENST00000426248 ZNF189O75820 626 aaPredicted RBP16.98■□□□□ 0.31
PKP4-205ENST00000426248 ETS2P15036 469 aa16.98■□□□□ 0.31
PKP4-205ENST00000426248 POLR2FP61218 127 aaKnown RBP16.98■□□□□ 0.31
PKP4-205ENST00000426248 ITIH3Q06033 890 aa16.98■□□□□ 0.31
PKP4-205ENST00000426248 ZNF268Q14587 947 aaPredicted RBP16.98■□□□□ 0.31
PKP4-205ENST00000426248 Q3C1V9 767 aa16.98■□□□□ 0.31
PKP4-205ENST00000426248 NOL9Q5SY16 702 aaKnown RBP16.98■□□□□ 0.31
PKP4-205ENST00000426248 SFMBT2Q5VUG0 894 aa16.98■□□□□ 0.31
PKP4-205ENST00000426248 ANO7Q6IWH7 933 aa16.98■□□□□ 0.31
PKP4-205ENST00000426248 RFX8Q6ZV50 586 aa16.98■□□□□ 0.31
PKP4-205ENST00000426248 RIOX2Q8IUF8 465 aa16.98■□□□□ 0.31
PKP4-205ENST00000426248 FAM186BQ8IYM0 893 aa16.98■□□□□ 0.31
PKP4-205ENST00000426248 KIAA0895Q8NCT3 520 aa16.98■□□□□ 0.31
PKP4-205ENST00000426248 TMEM237Q96Q45 408 aa16.98■□□□□ 0.31
PKP4-205ENST00000426248 INO80BQ9C086 356 aaPredicted RBP16.98■□□□□ 0.31
PKP4-205ENST00000426248 MYH8P13535 1937 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 IFI35P80217 286 aaPredicted RBP16.97■□□□□ 0.31
PKP4-205ENST00000426248 GIT2Q14161 759 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 TMEM119Q4V9L6 283 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 ERMARDQ5T6L9 678 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 PORCNQ9H237 461 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 ZMYND8Q9ULU4 1186 aaPredicted RBP16.97■□□□□ 0.31
PKP4-205ENST00000426248 SNX24Q9Y343 169 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 DDX60LQ5H9U9 1706 aaKnown RBP16.97■□□□□ 0.31
PKP4-205ENST00000426248 MAFGO15525 162 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 C12orf42Q96LP6 360 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 IGLV3-22A0A075B6J6 115 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 ASB14A6NK59 587 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 BTBD19C9JJ37 291 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 NVLO15381 856 aaKnown RBP16.97■□□□□ 0.31
PKP4-205ENST00000426248 SPATA31C1P0DKV0 1188 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 PRLRP16471 622 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 BYSLQ13895 437 aaKnown RBP16.97■□□□□ 0.31
PKP4-205ENST00000426248 MAN2A1Q16706 1144 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.97■□□□□ 0.31
PKP4-205ENST00000426248 XRRA1Q6P2D8 792 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 DNAAF5Q86Y56 855 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 DTNBP1Q96EV8 351 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 DDX50Q9BQ39 737 aaKnown RBP16.97■□□□□ 0.31
PKP4-205ENST00000426248 MROH8Q9H579 483 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 TBK1Q9UHD2 729 aa16.97■□□□□ 0.31
PKP4-205ENST00000426248 DENND3A2RUS2 1198 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 TARSP26639 723 aaKnown RBP16.96■□□□□ 0.31
PKP4-205ENST00000426248 KLRC1P26715 233 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 COPB2P35606 906 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 ARHGAP44Q17R89 818 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 USP38Q8NB14 1042 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 SEPT1Q8WYJ6 367 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 NDNQ99608 321 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 UBE2OQ9C0C9 1292 aaKnown RBP16.96■□□□□ 0.31
PKP4-205ENST00000426248 NKIRAS1Q9NYS0 192 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 PGAP2Q9UHJ9 254 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 SALL4Q9UJQ4 1053 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 LRRC37AA6NMS7 1700 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 LRRC10BA6NIK2 292 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 LIN7AO14910 233 aaPredicted RBP16.96■□□□□ 0.31
PKP4-205ENST00000426248 NR3C1P04150 777 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 HAUS6Q7Z4H7 955 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 LENG9Q96B70 501 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 AKT3Q9Y243 479 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 UBIAD1Q9Y5Z9 338 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 GSTTP1A0A1W2PQM5 241 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 GNA14O95837 355 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 FECHP22830 423 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 MAP7Q14244 749 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 SDCCAG8Q86SQ7 713 aaPredicted RBP16.96■□□□□ 0.31
PKP4-205ENST00000426248 TRIM50Q86XT4 487 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 ACCSQ96QU6 501 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 IWS1Q96ST2 819 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 DNAAF2Q9NVR5 837 aaKnown RBP16.96■□□□□ 0.31
PKP4-205ENST00000426248 ZNF711Q9Y462 761 aa16.96■□□□□ 0.31
PKP4-205ENST00000426248 TNNI1P19237 187 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 SP100P23497 879 aaPredicted RBP16.95■□□□□ 0.3
PKP4-205ENST00000426248 ADORA2AP29274 412 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 GSTT1P30711 240 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 CACNA2D1P54289 1103 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 PPP2R5CQ13362 524 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 USP37Q86T82 979 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 MREGQ8N565 214 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 MCUR1Q96AQ8 359 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 CTTNBP2NLQ9P2B4 639 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 MTRF1LQ9UGC7 380 aaKnown RBP16.95■□□□□ 0.3
PKP4-205ENST00000426248 COL2A1P02458 1487 aaPredicted RBP16.95■□□□□ 0.3
PKP4-205ENST00000426248 A0A0G2JLL6 359 aaPredicted RBP16.95■□□□□ 0.3
PKP4-205ENST00000426248 TMEM110-MUSTN1A8MSY1 372 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 RASGRF2O14827 1237 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 FAM200BP0CF97 657 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 TCF7P36402 384 aaPredicted RBP16.95■□□□□ 0.3
PKP4-205ENST00000426248 UAP1Q16222 522 aaPredicted RBP16.95■□□□□ 0.3
PKP4-205ENST00000426248 GJC2Q5T442 439 aaPredicted RBP16.95■□□□□ 0.3
PKP4-205ENST00000426248 PRRT2Q7Z6L0 340 aaPredicted RBP16.95■□□□□ 0.3
PKP4-205ENST00000426248 MRRFQ96E11 262 aaKnown RBP16.95■□□□□ 0.3
PKP4-205ENST00000426248 TXNRD2Q9NNW7 524 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 TXLNGQ9NUQ3 528 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms