RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 GRM5P41594 1212 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 CRYBB1P53674 252 aaPredicted RBP16.33■□□□□ 0.21
ACTB-204ENST00000425660 TFAMQ00059 246 aaKnown RBP16.33■□□□□ 0.21
ACTB-204ENST00000425660 SNX17Q15036 470 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 SGSM1Q2NKQ1 1148 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 SLC10A6Q3KNW5 377 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 SLC27A1Q6PCB7 646 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 PALB2Q86YC2 1186 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 CD99L2Q8TCZ2 262 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 U2AF1L4Q8WU68 220 aaKnown RBP16.33■□□□□ 0.21
ACTB-204ENST00000425660 TMEM40Q8WWA1 233 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 DDX1Q92499 740 aaKnown RBP16.33■□□□□ 0.21
ACTB-204ENST00000425660 ELMO3Q96BJ8 720 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 FAM212AQ96EL1 285 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 ERO1AQ96HE7 468 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 FAXDC2Q96IV6 333 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 ANKRD36BP1Q96IX9 119 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 GINS2Q9Y248 185 aa16.33■□□□□ 0.21
ACTB-204ENST00000425660 MROH7Q68CQ1 1323 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 LACTBL1A8MY62 500 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 GZMAP12544 262 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 CHRNB2P17787 502 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 FGFR4P22455 802 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 PDE6CP51160 858 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 CDR2Q01850 454 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 NBPF20Q3BBV1 942 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 SCARA3Q6AZY7 606 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 NOTUMQ6P988 496 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 CATSPER4Q7RTX7 472 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 APBB1IPQ7Z5R6 666 aaPredicted RBP16.33■□□□□ 0.2
ACTB-204ENST00000425660 XYLT2Q9H1B5 865 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 ISCUQ9H1K1 167 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 C2CD2Q9Y426 696 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 PCDHB2Q9Y5E7 798 aa16.33■□□□□ 0.2
ACTB-204ENST00000425660 THSD7BQ9C0I4 1608 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 TNNC2P02585 160 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 ATP1A1P05023 1023 aaKnown RBP16.32■□□□□ 0.2
ACTB-204ENST00000425660 NFICP08651 508 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 TMEM253P0C7T8 217 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 GALCP54803 685 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 RPAINQ86UA6 219 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 NT5DC4Q86YG4 428 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 CD302Q8IX05 232 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 RPUSD2Q8IZ73 545 aaKnown RBP16.32■□□□□ 0.2
ACTB-204ENST00000425660 UBR7Q8N806 425 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 CXorf38Q8TB03 319 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 TAF4BQ92750 862 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 ACAP3Q96P50 834 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 PLEKHA5Q9HAU0 1116 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 ACP6Q9NPH0 428 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 TSKSQ9UJT2 592 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 ANK1P16157 1881 aa16.32■□□□□ 0.2
ACTB-204ENST00000425660 ANKRD62A6NC57 917 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 ENC1O14682 589 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 RPLP2P05387 115 aaKnown RBP16.31■□□□□ 0.2
ACTB-204ENST00000425660 ASGR1P07306 291 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 BPIFB4P59827 614 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 MYL6P60660 151 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 FMO1Q01740 532 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 ZNF677Q86XU0 584 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 C1orf127Q8N9H9 656 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 TAS2R14Q9NYV8 317 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 SIX4Q9UIU6 781 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 SAR1BQ9Y6B6 198 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 UMODL1Q5DID0 1318 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 BUB1O43683 1085 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 KRT5P13647 590 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 PRLRP16471 622 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 TRPC3Q13507 836 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 KCNA10Q16322 511 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 IFI16Q16666 785 aaKnown RBP16.31■□□□□ 0.2
ACTB-204ENST00000425660 JADE1Q6IE81 842 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 GDF6Q6KF10 455 aaPredicted RBP16.31■□□□□ 0.2
ACTB-204ENST00000425660 SERINC5Q86VE9 423 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 PCDHB18PQ96TA0 734 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 NIF3L1Q9GZT8 377 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 VRTNQ9H8Y1 702 aa16.31■□□□□ 0.2
ACTB-204ENST00000425660 DDX20Q9UHI6 824 aaKnown RBP16.31■□□□□ 0.2
ACTB-204ENST00000425660 NCANO14594 1321 aa16.3■□□□□ 0.2
ACTB-204ENST00000425660 MMEP08473 750 aa16.3■□□□□ 0.2
ACTB-204ENST00000425660 ZNF132P52740 706 aa16.3■□□□□ 0.2
ACTB-204ENST00000425660 TCEAL1Q15170 157 aa16.3■□□□□ 0.2
ACTB-204ENST00000425660 WHAMMP3Q1A5X7 153 aa16.3■□□□□ 0.2
ACTB-204ENST00000425660 DNAAF5Q86Y56 855 aa16.3■□□□□ 0.2
ACTB-204ENST00000425660 DNAJC5GQ8N7S2 189 aa16.3■□□□□ 0.2
ACTB-204ENST00000425660 PCSK9Q8NBP7 692 aaKnown RBP16.3■□□□□ 0.2
ACTB-204ENST00000425660 CCDC94Q9BW85 323 aaPredicted RBP16.3■□□□□ 0.2
ACTB-204ENST00000425660 CARD6Q9BX69 1037 aa16.3■□□□□ 0.2
ACTB-204ENST00000425660 CELF4Q9BZC1 486 aaKnown RBP16.3■□□□□ 0.2
ACTB-204ENST00000425660 DERAQ9Y315 318 aa16.3■□□□□ 0.2
ACTB-204ENST00000425660 RTN2O75298 545 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 NPTXRO95502 500 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 ZNF699Q32M78 642 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 LRRC57Q8N9N7 239 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 LRRN4CLQ8ND94 238 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 RAET1EQ8TD07 263 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 CTNNBL1Q8WYA6 563 aaPredicted RBP16.29■□□□□ 0.2
ACTB-204ENST00000425660 RFFLQ8WZ73 363 aa16.29■□□□□ 0.2
ACTB-204ENST00000425660 EIF2AQ9BY44 585 aaKnown RBP16.29■□□□□ 0.2
ACTB-204ENST00000425660 SEPT11Q9NVA2 429 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms